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Protein

UDP-N-acetylglucosamine transferase subunit alg13

Gene

alg13

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway (By similarity).By similarity

Catalytic activityi

UDP-N-acetyl-D-glucosamine + N-acetyl-D-glucosaminyl-diphosphodolichol = UDP + N,N'-diacetylchitobiosyl-diphosphodolichol.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT1. Glycosyltransferase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
UDP-N-acetylglucosamine transferase subunit alg13 (EC:2.4.1.141)
Alternative name(s):
Asparagine-linked glycosylation protein 13
Gene namesi
Name:alg13
ORF Names:SPAC56E4.02c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC56E4.02c.
PomBaseiSPAC56E4.02c. alg13.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • endoplasmic reticulum Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 162162UDP-N-acetylglucosamine transferase subunit alg13PRO_0000215603Add
BLAST

Proteomic databases

MaxQBiO14190.

Interactioni

Subunit structurei

Heterodimer with alg14 to form a functional enzyme.By similarity

Protein-protein interaction databases

MINTiMINT-4671244.

Structurei

3D structure databases

ProteinModelPortaliO14190.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 28 family.Curated

Phylogenomic databases

HOGENOMiHOG000192807.
InParanoidiO14190.
KOiK07432.
OMAiDGLMDNH.
OrthoDBiEOG7NKKXH.
PhylomeDBiO14190.

Family and domain databases

InterProiIPR007235. Glyco_trans_28_C.
[Graphical view]
PfamiPF04101. Glyco_tran_28_C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O14190-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNAFVTVGST QFDDLIRAVL KPEFQHCLVK HGINQLIVQY GKGKQAFGDP
60 70 80 90 100
KSVAGLTILG FDYAPEIESY IHDASIVISH AGAGSILQTL RSGKRLLVVP
110 120 130 140 150
NESLMDNHQV ELATKLASMN YLVTCSTSNL VEGLEELYPK ILTPFPKSDC
160
STFQKVMQDV AR
Length:162
Mass (Da):17,769
Last modified:January 1, 1998 - v1
Checksum:iE93A6A93FF52CB35
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB16393.1.
PIRiT38904.
RefSeqiNP_593269.1. NM_001018666.2.

Genome annotation databases

EnsemblFungiiSPAC56E4.02c.1; SPAC56E4.02c.1:pep; SPAC56E4.02c.
GeneIDi2543352.
KEGGispo:SPAC56E4.02c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB16393.1.
PIRiT38904.
RefSeqiNP_593269.1. NM_001018666.2.

3D structure databases

ProteinModelPortaliO14190.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4671244.

Protein family/group databases

CAZyiGT1. Glycosyltransferase Family 1.

Proteomic databases

MaxQBiO14190.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC56E4.02c.1; SPAC56E4.02c.1:pep; SPAC56E4.02c.
GeneIDi2543352.
KEGGispo:SPAC56E4.02c.

Organism-specific databases

EuPathDBiFungiDB:SPAC56E4.02c.
PomBaseiSPAC56E4.02c. alg13.

Phylogenomic databases

HOGENOMiHOG000192807.
InParanoidiO14190.
KOiK07432.
OMAiDGLMDNH.
OrthoDBiEOG7NKKXH.
PhylomeDBiO14190.

Miscellaneous databases

NextBioi20804367.
PROiO14190.

Family and domain databases

InterProiIPR007235. Glyco_trans_28_C.
[Graphical view]
PfamiPF04101. Glyco_tran_28_C. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.

Entry informationi

Entry nameiALG13_SCHPO
AccessioniPrimary (citable) accession number: O14190
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: January 1, 1998
Last modified: December 9, 2015
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.