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Protein

Peroxisomal membrane protein pex13

Gene

pex13

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Component of the peroxisomal translocation machinery with pex14 and pex17.By similarity

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-SPO-8866654 E3 ubiquitin ligases ubiquitinate target proteins
R-SPO-9033241 Peroxisomal protein import

Names & Taxonomyi

Protein namesi
Recommended name:
Peroxisomal membrane protein pex13
Alternative name(s):
Peroxin-13
Gene namesi
Name:pex13
ORF Names:SPAC3C7.10
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC3C7.10
PomBaseiSPAC3C7.10 pex13

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei178 – 198HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane, Peroxisome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003104791 – 288Peroxisomal membrane protein pex13Add BLAST288

Proteomic databases

MaxQBiO14136
PaxDbiO14136
PRIDEiO14136

Interactioni

Protein-protein interaction databases

BioGridi279481, 21 interactors
STRINGi4896.SPAC3C7.10.1

Structurei

3D structure databases

ProteinModelPortaliO14136
SMRiO14136
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini222 – 288SH3PROSITE-ProRule annotationAdd BLAST67

Sequence similaritiesi

Belongs to the peroxin-13 family.Curated

Keywords - Domaini

SH3 domain, Transmembrane, Transmembrane helix

Phylogenomic databases

InParanoidiO14136
KOiK13344
OMAiSMAASHE
OrthoDBiEOG092C3U7P
PhylomeDBiO14136

Family and domain databases

InterProiView protein in InterPro
IPR007223 Peroxin-13_N
IPR035463 Pex13
IPR036028 SH3-like_dom_sf
IPR001452 SH3_domain
PANTHERiPTHR19332 PTHR19332, 1 hit
PfamiView protein in Pfam
PF04088 Peroxin-13_N, 1 hit
PF00018 SH3_1, 1 hit
PRINTSiPR00452 SH3DOMAIN
SMARTiView protein in SMART
SM00326 SH3, 1 hit
SUPFAMiSSF50044 SSF50044, 1 hit
PROSITEiView protein in PROSITE
PS50002 SH3, 1 hit

Sequencei

Sequence statusi: Complete.

O14136-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METNQNEKGP SLPSYPAGGI MSVSNSNADT NQGVTQHPLA NRIVNPNYYN
60 70 80 90 100
MGFNPYSGFN SFIPSFNPFV PLETNLPGNG PISSLQVIES IVGAVGSIAQ
110 120 130 140 150
VLESTLMAAH MSYNTFVSVS ENLNKLKSSI GAIFGIVSLL SRLKRLVLKF
160 170 180 190 200
FKHSKIDEMN SQEYDVFEKE EGNHKNSIYS IVSSLAIILG LVGLPYAIIR
210 220 230 240 250
LFKNIYEKEK QIQQAKIRKK IDSLEFCKAD YEFMSRDPGV EMSLKKGDII
260 270 280
AILSKTDTQG NPCEWWQGRK RSGETGWFPS NYCSIISR
Length:288
Mass (Da):32,055
Last modified:January 1, 1998 - v1
Checksum:i992F93538CDE1E43
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAB16740.1
PIRiT38696
RefSeqiNP_593611.1, NM_001019042.2

Genome annotation databases

EnsemblFungiiSPAC3C7.10.1; SPAC3C7.10.1:pep; SPAC3C7.10
GeneIDi2543046
KEGGispo:SPAC3C7.10

Entry informationi

Entry nameiPEX13_SCHPO
AccessioniPrimary (citable) accession number: O14136
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
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