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Protein

40S ribosomal protein S8-A

Gene

rps801

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Miscellaneous

There are two genes for S8 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-SPO-72702. Ribosomal scanning and start codon recognition.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S8-A
Gene namesi
Name:rps801
Synonyms:rps8, rps8a
ORF Names:SPAC2C4.16c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC2C4.16c.
PomBaseiSPAC2C4.16c. rps801.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • cytosolic small ribosomal subunit Source: PomBase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001222561 – 20040S ribosomal protein S8-AAdd BLAST200

Proteomic databases

MaxQBiO14049.
PRIDEiO14049.

Interactioni

Protein-protein interaction databases

BioGridi277993. 30 interactors.
MINTiMINT-4670067.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000211544.
InParanoidiO14049.
KOiK02995.
OMAiNTIFRFE.
OrthoDBiEOG092C59CG.
PhylomeDBiO14049.

Family and domain databases

InterProiView protein in InterPro
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiView protein in Pfam
PF01201. Ribosomal_S8e. 1 hit.
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiView protein in PROSITE
PS01193. RIBOSOMAL_S8E. 1 hit.

Sequencei

Sequence statusi: Complete.

O14049-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGITRDSRHK RSATGAKRAQ YRKKRKFELG RQPSNTRIGP KRIHEVRVRG
60 70 80 90 100
GNKKFRALRL DSGNFSWGSE GVSKKTRIIQ VAYHPSNNEL VRTNTLTKSA
110 120 130 140 150
IVQIDAAPFR VWYETHYGIL MGSKGKKATS TPNPKSKHVQ RKHSARLGDS
160 170 180 190 200
KVDSALETQF AAGRLYAVVS SRPGQSGRCD GYILEGEELH FYLRRMAPKK
Length:200
Mass (Da):22,593
Last modified:January 1, 1998 - v1
Checksum:iF03C815C75E35E3B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB16376.1.
PIRiT38527.
RefSeqiNP_594519.1. NM_001019948.2.

Genome annotation databases

EnsemblFungiiSPAC2C4.16c.1; SPAC2C4.16c.1:pep; SPAC2C4.16c.
GeneIDi2541491.
KEGGispo:SPAC2C4.16c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB16376.1.
PIRiT38527.
RefSeqiNP_594519.1. NM_001019948.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi277993. 30 interactors.
MINTiMINT-4670067.

Proteomic databases

MaxQBiO14049.
PRIDEiO14049.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC2C4.16c.1; SPAC2C4.16c.1:pep; SPAC2C4.16c.
GeneIDi2541491.
KEGGispo:SPAC2C4.16c.

Organism-specific databases

EuPathDBiFungiDB:SPAC2C4.16c.
PomBaseiSPAC2C4.16c. rps801.

Phylogenomic databases

HOGENOMiHOG000211544.
InParanoidiO14049.
KOiK02995.
OMAiNTIFRFE.
OrthoDBiEOG092C59CG.
PhylomeDBiO14049.

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-SPO-72702. Ribosomal scanning and start codon recognition.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiPR:O14049.

Family and domain databases

InterProiView protein in InterPro
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiView protein in Pfam
PF01201. Ribosomal_S8e. 1 hit.
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiView protein in PROSITE
PS01193. RIBOSOMAL_S8E. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS8A_SCHPO
AccessioniPrimary (citable) accession number: O14049
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 1, 1998
Last modified: April 12, 2017
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.