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Protein

Suppressor of glycerol defect protein 1

Gene

sgd1

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in osmoregulatory glycerol response.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Suppressor of glycerol defect protein 1
Gene namesi
Name:sgd1
ORF Names:SPAC24C9.11
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC24C9.11.
PomBaseiSPAC24C9.11. sgd1.

Subcellular locationi

GO - Cellular componenti

  • nucleolus Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003160291 – 775Suppressor of glycerol defect protein 1Add BLAST775

Proteomic databases

MaxQBiO13971.
PRIDEiO13971.

Interactioni

Protein-protein interaction databases

BioGridi278107. 1 interactor.

Structurei

3D structure databases

ProteinModelPortaliO13971.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini262 – 463MIF4GPROSITE-ProRule annotationAdd BLAST202
Domaini565 – 689MIPROSITE-ProRule annotationAdd BLAST125

Sequence similaritiesi

Belongs to the CWC22 family.Curated
Contains 1 MI domain.PROSITE-ProRule annotation
Contains 1 MIF4G domain.Curated

Phylogenomic databases

InParanoidiO13971.
KOiK17583.
OMAiEREISMR.
OrthoDBiEOG092C17DZ.
PhylomeDBiO13971.

Family and domain databases

Gene3Di1.25.40.180. 1 hit.
InterProiIPR016024. ARM-type_fold.
IPR003891. Initiation_fac_eIF4g_MI.
IPR016021. MIF4-like.
IPR003890. MIF4G-like_typ-3.
[Graphical view]
PfamiPF02847. MA3. 1 hit.
PF02854. MIF4G. 1 hit.
[Graphical view]
SMARTiSM00544. MA3. 1 hit.
SM00543. MIF4G. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiPS51366. MI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O13971-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRPIKKSRSL KLPKSILEEI GESDSSARRG KRNHNLPHRE KRKFARISRG
60 70 80 90 100
KNGYENRKIT EEGDSKSSEL NDDYLDAHRK SSTKKKSSQN KQAKESKLLD
110 120 130 140 150
PIAFQHKIAL EEDDREIAHL EKMLGIKSKD KSAHSKIDKE FGWLLEDLDQ
160 170 180 190 200
EIDDIGVPGT EDPSYGHSED SEVSDDTGDH GSVDELESER EGNSGEEEEE
210 220 230 240 250
FHGFESNSDE FHQPETKPIR MDPLKPAVPS LPNANVGSKY VPPSLRKKLG
260 270 280 290 300
GDKESEDALR LRRKLQGSLN KLSIANISSI IKEIEVLYME NSRHSVTSTI
310 320 330 340 350
TNLLLQTVMG RESMLDQLAI VYAALATALY RIVGNDFGAH LLQTLVERFL
360 370 380 390 400
QLYKSKEKEP LSSHKETSNL IVFFVELYNF QLVSCVLVYD LIRLFLRSLT
410 420 430 440 450
ELNVEMLLKI VLNCGGQLRS DDPTSLQDIV TEMNLLLASA DPSTISVRTK
460 470 480 490 500
FMVESITNLK ENKKTKVANA SAQSKFEAVN QLKKFLGSLG NRSLNAREPL
510 520 530 540 550
RVTLEDIEQI ETKGRWWLVG ASWNNVPSGD NTLSTEALQD KKKSEELTAH
560 570 580 590 600
SKILQAAKKL RLNSTLRTSI FVALVGSEDY IDAWERVLKL HLKRNQLPEI
610 620 630 640 650
AYVILHCVGN EKLYNPFYGL VALKCCTLQH NLKKSFQFSL WDFFNELQPD
660 670 680 690 700
DDSEEREISM RRIVNLAKLY ASLVIEAAQP LTILKHVDFM AINAQMQTFL
710 720 730 740 750
LVFFTDIILG VKDDLQLVKI FENCKAEKNL SSKVDWFLKT YVRKNPLVDN
760 770
SKKALFKSNL AMASAILQSI SKEEI
Length:775
Mass (Da):87,871
Last modified:January 1, 1998 - v1
Checksum:i9013685BC390E4AA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB11268.1.
PIRiT38352.
RefSeqiNP_594036.1. NM_001019461.2.

Genome annotation databases

EnsemblFungiiSPAC24C9.11.1; SPAC24C9.11.1:pep; SPAC24C9.11.
GeneIDi2541610.
KEGGispo:SPAC24C9.11.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB11268.1.
PIRiT38352.
RefSeqiNP_594036.1. NM_001019461.2.

3D structure databases

ProteinModelPortaliO13971.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi278107. 1 interactor.

Proteomic databases

MaxQBiO13971.
PRIDEiO13971.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC24C9.11.1; SPAC24C9.11.1:pep; SPAC24C9.11.
GeneIDi2541610.
KEGGispo:SPAC24C9.11.

Organism-specific databases

EuPathDBiFungiDB:SPAC24C9.11.
PomBaseiSPAC24C9.11. sgd1.

Phylogenomic databases

InParanoidiO13971.
KOiK17583.
OMAiEREISMR.
OrthoDBiEOG092C17DZ.
PhylomeDBiO13971.

Miscellaneous databases

PROiO13971.

Family and domain databases

Gene3Di1.25.40.180. 1 hit.
InterProiIPR016024. ARM-type_fold.
IPR003891. Initiation_fac_eIF4g_MI.
IPR016021. MIF4-like.
IPR003890. MIF4G-like_typ-3.
[Graphical view]
PfamiPF02847. MA3. 1 hit.
PF02854. MIF4G. 1 hit.
[Graphical view]
SMARTiSM00544. MA3. 1 hit.
SM00543. MIF4G. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiPS51366. MI. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSGD1_SCHPO
AccessioniPrimary (citable) accession number: O13971
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 1, 1998
Last modified: November 30, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.