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Protein

Uncharacterized oxidoreductase C22A12.17c

Gene

SPAC22A12.17c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei159 – 1591SubstrateBy similarity
Active sitei172 – 1721Proton acceptorPROSITE-ProRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi25 – 4622NAD or NADPBy similarityAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Enzyme and pathway databases

ReactomeiR-SPO-390918. Peroxisomal lipid metabolism.
R-SPO-535734. Fatty acid, triacylglycerol, and ketone body metabolism.
R-SPO-77288. mitochondrial fatty acid beta-oxidation of unsaturated fatty acids.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized oxidoreductase C22A12.17c (EC:1.-.-.-)
Gene namesi
ORF Names:SPAC22A12.17c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC22A12.17c.
PomBaseiSPAC22A12.17c.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 261261Uncharacterized oxidoreductase C22A12.17cPRO_0000310837Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi278335. 5 interactions.
MINTiMINT-4668889.

Structurei

3D structure databases

ProteinModelPortaliO13908.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

InParanoidiO13908.
OMAiHQRIRIN.
OrthoDBiEOG7HQNM0.
PhylomeDBiO13908.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O13908-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVAPAHNYES RNILDLLSLK GKNAVVFGGA RGIGHAICSV FAEAGANAFI
60 70 80 90 100
VYNTTPGEKA AKEIAQANGV KTYTCKCDVT IPKEVEHAFA EIQKVFDTID
110 120 130 140 150
IVVPNNGICT GKSAIDMTYE EFANEINVNL LGVFNVAHNA GPIFQKQGHG
160 170 180 190 200
SLVATASMSG VVVNVPQQQC AYNTSKAGVI QLIKSLAVEW RKFARVNCVS
210 220 230 240 250
PGYTTSDMTG GKFHKEWEPY TPFERNGLAK EIASAYLYLA SDAASYASGT
260
NLIVDGGYTS I
Length:261
Mass (Da):27,898
Last modified:January 1, 1998 - v1
Checksum:i2F943E7AAE482CDE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB16587.1.
PIRiT38157.
RefSeqiNP_593247.1. NM_001018644.2.

Genome annotation databases

EnsemblFungiiSPAC22A12.17c.1; SPAC22A12.17c.1:pep; SPAC22A12.17c.
GeneIDi2541844.
KEGGispo:SPAC22A12.17c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB16587.1.
PIRiT38157.
RefSeqiNP_593247.1. NM_001018644.2.

3D structure databases

ProteinModelPortaliO13908.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi278335. 5 interactions.
MINTiMINT-4668889.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC22A12.17c.1; SPAC22A12.17c.1:pep; SPAC22A12.17c.
GeneIDi2541844.
KEGGispo:SPAC22A12.17c.

Organism-specific databases

EuPathDBiFungiDB:SPAC22A12.17c.
PomBaseiSPAC22A12.17c.

Phylogenomic databases

InParanoidiO13908.
OMAiHQRIRIN.
OrthoDBiEOG7HQNM0.
PhylomeDBiO13908.

Enzyme and pathway databases

ReactomeiR-SPO-390918. Peroxisomal lipid metabolism.
R-SPO-535734. Fatty acid, triacylglycerol, and ketone body metabolism.
R-SPO-77288. mitochondrial fatty acid beta-oxidation of unsaturated fatty acids.

Miscellaneous databases

PROiO13908.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYF3H_SCHPO
AccessioniPrimary (citable) accession number: O13908
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: January 1, 1998
Last modified: June 8, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.