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Protein

40S ribosomal protein S24-A

Gene

rps2401

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Miscellaneous

There are two genes for S24 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-SPO-72702. Ribosomal scanning and start codon recognition.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S24-A
Gene namesi
Name:rps2401
Synonyms:rps24a
ORF Names:SPAC17G6.06
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC17G6.06.
PomBaseiSPAC17G6.06. rps2401.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • cytosolic small ribosomal subunit Source: PomBase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001376342 – 13440S ribosomal protein S24-AAdd BLAST133

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylserineBy similarity1

Keywords - PTMi

Acetylation

Proteomic databases

MaxQBiO13784.
PRIDEiO13784.

Interactioni

Protein-protein interaction databases

BioGridi278892. 15 interactors.
IntActiO13784. 1 interactor.
MINTiMINT-4667933.
STRINGi4896.SPAC17G6.06.1.

Structurei

3D structure databases

ProteinModelPortaliO13784.
SMRiO13784.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000186306.
InParanoidiO13784.
KOiK02974.
OMAiKASTIRT.
OrthoDBiEOG092C5MLH.
PhylomeDBiO13784.

Family and domain databases

HAMAPiMF_00545. Ribosomal_S24e. 1 hit.
InterProiView protein in InterPro
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR001976. Ribosomal_S24e.
IPR018098. Ribosomal_S24e_CS.
PANTHERiPTHR10496. PTHR10496. 1 hit.
PfamiView protein in Pfam
PF01282. Ribosomal_S24e. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD006052. Ribosomal_S24e. 1 hit.
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiView protein in PROSITE
PS00529. RIBOSOMAL_S24E. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O13784-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEAVTIRTR KFMTNRLLQR KQMVVDILHP GKANISKNDL REKLGQMYKT
60 70 80 90 100
DASAVQAFGL RTHYGGGRTT GFALIYDDVE AMKKFEPHYR LVRVGHAEPI
110 120 130
QKVARQQRKQ RKNRGKKVFG TGKRLAKRKS KQQD
Length:134
Mass (Da):15,470
Last modified:January 23, 2007 - v3
Checksum:i785B6BEDC55BB725
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB16217.1.
PIRiT37838.
RefSeqiNP_594253.1. NM_001019676.2.

Genome annotation databases

EnsemblFungiiSPAC17G6.06.1; SPAC17G6.06.1:pep; SPAC17G6.06.
GeneIDi2542430.
KEGGispo:SPAC17G6.06.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS24A_SCHPO
AccessioniPrimary (citable) accession number: O13784
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 23, 2007
Last modified: July 5, 2017
This is version 127 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families