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O13780 (YEO2_SCHPO) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uncharacterized protein C17G6.02c
Gene names
ORF Names:SPAC17G6.02c
OrganismSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) [Reference proteome]
Taxonomic identifier284812 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces ›

Protein attributes

Sequence length324 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Ref.2.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 324324Uncharacterized protein C17G6.02c
PRO_0000116726

Regions

Transmembrane14 – 3421Helical; Potential
Transmembrane40 – 6021Helical; Potential
Transmembrane72 – 9221Helical; Potential
Transmembrane115 – 13521Helical; Potential
Transmembrane156 – 17621Helical; Potential
Transmembrane206 – 22318Helical; Potential
Transmembrane238 – 25821Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
O13780 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 3DA93A397C4C0C0B

FASTA32435,930
        10         20         30         40         50         60 
MYYDNAFGYI PAHWVTILAV ILFSIAFILH VACLAFTRKW LVIVPIIGTI GELAGWACRL 

        70         80         90        100        110        120 
DASYNPDDYN AFLGQIIALI IAPVFYSAQA YVLFHHIVLL YGPRFSVLSP KLYGGIFITF 

       130        140        150        160        170        180 
DIIALILQAA GGGVAGGADS GSQLQTQGSQ IMLGGICFQL FTIVVFSILF SIFFIALYTH 

       190        200        210        220        230        240 
HPIRPSTGRR EPDVPYTRVR TMSCNCLALA TFAMVVRSVY RVIELAQGWE GAVITHEVWF 

       250        260        270        280        290        300 
DIFDFIPMIF TSALLIPSLY PALERSKLPF TEKHVSSMEY APSEYGPSEY GPSINDITNM 

       310        320 
SAVIYPDSFL APKDPKKSFS SEEL

« Hide

References

[1]"The genome sequence of Schizosaccharomyces pombe."
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. expand/collapse author list , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 972 / ATCC 24843.
[2]"Large-scale screening of intracellular protein localization in living fission yeast cells by the use of a GFP-fusion genomic DNA library."
Ding D.-Q., Tomita Y., Yamamoto A., Chikashige Y., Haraguchi T., Hiraoka Y.
Genes Cells 5:169-190(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 115-314, SUBCELLULAR LOCATION.
Strain: ATCC 38364 / 968.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU329670 Genomic DNA. Translation: CAB16213.1.
AB027898 Genomic DNA. Translation: BAA87202.1.
PIRT37834.
RefSeqNP_594249.1. NM_001019672.2.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING4896.SPAC17G6.02c-1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiSPAC17G6.02c.1; SPAC17G6.02c.1:pep; SPAC17G6.02c.
GeneID2542288.
KEGGspo:SPAC17G6.02c.

Organism-specific databases

PomBaseSPAC17G6.02c.

Phylogenomic databases

eggNOGNOG81917.
OMAQMASITV.
OrthoDBEOG4MSH7H.

Family and domain databases

InterProIPR007568. RTA1.
[Graphical view]
PfamPF04479. RTA1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20803351.

Entry information

Entry nameYEO2_SCHPO
AccessionPrimary (citable) accession number: O13780
Secondary accession number(s): Q9USB2
Entry history
Integrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: January 1, 1998
Last modified: April 3, 2013
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Schizosaccharomyces pombe

Schizosaccharomyces pombe: entries and gene names

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents