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Protein

Uncharacterized protein C17G6.02c

Gene

SPAC17G6.02c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. phospholipid-translocating ATPase activity Source: PomBase

GO - Biological processi

  1. cellular response to oxidative stress Source: PomBase
  2. phospholipid translocation Source: PomBase
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C17G6.02c
Gene namesi
ORF Names:SPAC17G6.02c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
ProteomesiUP000002485: Chromosome I

Organism-specific databases

PomBaseiSPAC17G6.02c.

Subcellular locationi

Membrane 1 Publication; Multi-pass membrane protein 1 Publication

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei14 – 3421HelicalSequence AnalysisAdd
BLAST
Transmembranei40 – 6021HelicalSequence AnalysisAdd
BLAST
Transmembranei72 – 9221HelicalSequence AnalysisAdd
BLAST
Transmembranei115 – 13521HelicalSequence AnalysisAdd
BLAST
Transmembranei156 – 17621HelicalSequence AnalysisAdd
BLAST
Transmembranei206 – 22318HelicalSequence AnalysisAdd
BLAST
Transmembranei238 – 25821HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. cell division site Source: PomBase
  2. cell tip Source: PomBase
  3. cytoplasm Source: PomBase
  4. Golgi apparatus Source: PomBase
  5. integral component of membrane Source: UniProtKB-KW
  6. plasma membrane Source: PomBase
  7. vacuole Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 324324Uncharacterized protein C17G6.02cPRO_0000116726Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi278756. 10 interactions.
MINTiMINT-4667899.
STRINGi4896.SPAC17G6.02c-1.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG81917.
InParanoidiO13780.
OMAiAVITHEV.
OrthoDBiEOG7X0VV6.
PhylomeDBiO13780.

Family and domain databases

InterProiIPR007568. RTA1.
[Graphical view]
PfamiPF04479. RTA1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O13780-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYYDNAFGYI PAHWVTILAV ILFSIAFILH VACLAFTRKW LVIVPIIGTI
60 70 80 90 100
GELAGWACRL DASYNPDDYN AFLGQIIALI IAPVFYSAQA YVLFHHIVLL
110 120 130 140 150
YGPRFSVLSP KLYGGIFITF DIIALILQAA GGGVAGGADS GSQLQTQGSQ
160 170 180 190 200
IMLGGICFQL FTIVVFSILF SIFFIALYTH HPIRPSTGRR EPDVPYTRVR
210 220 230 240 250
TMSCNCLALA TFAMVVRSVY RVIELAQGWE GAVITHEVWF DIFDFIPMIF
260 270 280 290 300
TSALLIPSLY PALERSKLPF TEKHVSSMEY APSEYGPSEY GPSINDITNM
310 320
SAVIYPDSFL APKDPKKSFS SEEL
Length:324
Mass (Da):35,930
Last modified:January 1, 1998 - v1
Checksum:i3DA93A397C4C0C0B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB16213.1.
AB027898 Genomic DNA. Translation: BAA87202.1.
PIRiT37834.
RefSeqiNP_594249.1. NM_001019672.2.

Genome annotation databases

EnsemblFungiiSPAC17G6.02c.1; SPAC17G6.02c.1:pep; SPAC17G6.02c.
GeneIDi2542288.
KEGGispo:SPAC17G6.02c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB16213.1.
AB027898 Genomic DNA. Translation: BAA87202.1.
PIRiT37834.
RefSeqiNP_594249.1. NM_001019672.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi278756. 10 interactions.
MINTiMINT-4667899.
STRINGi4896.SPAC17G6.02c-1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC17G6.02c.1; SPAC17G6.02c.1:pep; SPAC17G6.02c.
GeneIDi2542288.
KEGGispo:SPAC17G6.02c.

Organism-specific databases

PomBaseiSPAC17G6.02c.

Phylogenomic databases

eggNOGiNOG81917.
InParanoidiO13780.
OMAiAVITHEV.
OrthoDBiEOG7X0VV6.
PhylomeDBiO13780.

Miscellaneous databases

NextBioi20803351.

Family and domain databases

InterProiIPR007568. RTA1.
[Graphical view]
PfamiPF04479. RTA1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "Large-scale screening of intracellular protein localization in living fission yeast cells by the use of a GFP-fusion genomic DNA library."
    Ding D.-Q., Tomita Y., Yamamoto A., Chikashige Y., Haraguchi T., Hiraoka Y.
    Genes Cells 5:169-190(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 115-314, SUBCELLULAR LOCATION.
    Strain: ATCC 38364 / 968.

Entry informationi

Entry nameiYEO2_SCHPO
AccessioniPrimary (citable) accession number: O13780
Secondary accession number(s): Q9USB2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: January 1, 1998
Last modified: February 4, 2015
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.