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Protein

60S ribosomal protein L8

Gene

rpl8

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L8
Alternative name(s):
L4
L7A
Gene namesi
Name:rpl8
ORF Names:SPBC29A3.04
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC29A3.04.
PomBaseiSPBC29A3.04. rpl8.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 25925860S ribosomal protein L8PRO_0000136759Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei11 – 111Phosphoserine1 Publication
Modified residuei33 – 331Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiO13672.

PTM databases

iPTMnetiO13672.

Interactioni

Protein-protein interaction databases

BioGridi277045. 10 interactions.
IntActiO13672. 4 interactions.
MINTiMINT-4782010.

Structurei

3D structure databases

ProteinModelPortaliO13672.
SMRiO13672. Positions 99-218.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L7Ae family.Curated

Phylogenomic databases

HOGENOMiHOG000216644.
InParanoidiO13672.
KOiK02936.
OMAiNDNSEVR.
OrthoDBiEOG092C4PDY.
PhylomeDBiO13672.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
InterProiIPR029064. L30e-like.
IPR001921. Ribosomal_L7A/L8.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
IPR018492. Ribosomal_L7Ae/L8/Nhp2.
IPR004037. Ribosomal_L7Ae_CS.
[Graphical view]
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
PRINTSiPR00881. L7ARS6FAMILY.
PR00882. RIBOSOMALL7A.
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiPS01082. RIBOSOMAL_L7AE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O13672-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPKSKKVAP SPFAQPKAAK TTKNPLFVSR PRSFGIGQDI QPKRDLSRFV
60 70 80 90 100
KWPEYIRLQR RRKILNLRLK VPPAIAQFQK TLDKNTATQV FKLLNKYRPE
110 120 130 140 150
TAAEKKQRLV AEAEAVANGK SAQDVSKKPY NVKYGLNHVV ALIEAKKAKL
160 170 180 190 200
VLIASDVDPI ELVVFLPALC KKMGVPYAIV KNKARLGTVI HQKTAAVLAV
210 220 230 240 250
TEVREEDKNE LASIVSAVDA NFSAKYDESR RKWGGGIMGG KTQALLAKRA

KAAAATVRL
Length:259
Mass (Da):28,607
Last modified:January 23, 2007 - v3
Checksum:iA37A4873E4A2A798
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ001133 Genomic DNA. Translation: CAA04548.1.
CU329671 Genomic DNA. Translation: CAA18381.1.
AB005750 mRNA. Translation: BAA21551.1.
PIRiT40075.
RefSeqiNP_595832.1. NM_001021736.2.

Genome annotation databases

EnsemblFungiiSPBC29A3.04.1; SPBC29A3.04.1:pep; SPBC29A3.04.
GeneIDi2540517.
KEGGispo:SPBC29A3.04.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ001133 Genomic DNA. Translation: CAA04548.1.
CU329671 Genomic DNA. Translation: CAA18381.1.
AB005750 mRNA. Translation: BAA21551.1.
PIRiT40075.
RefSeqiNP_595832.1. NM_001021736.2.

3D structure databases

ProteinModelPortaliO13672.
SMRiO13672. Positions 99-218.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi277045. 10 interactions.
IntActiO13672. 4 interactions.
MINTiMINT-4782010.

PTM databases

iPTMnetiO13672.

Proteomic databases

MaxQBiO13672.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC29A3.04.1; SPBC29A3.04.1:pep; SPBC29A3.04.
GeneIDi2540517.
KEGGispo:SPBC29A3.04.

Organism-specific databases

EuPathDBiFungiDB:SPBC29A3.04.
PomBaseiSPBC29A3.04. rpl8.

Phylogenomic databases

HOGENOMiHOG000216644.
InParanoidiO13672.
KOiK02936.
OMAiNDNSEVR.
OrthoDBiEOG092C4PDY.
PhylomeDBiO13672.

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiO13672.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
InterProiIPR029064. L30e-like.
IPR001921. Ribosomal_L7A/L8.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
IPR018492. Ribosomal_L7Ae/L8/Nhp2.
IPR004037. Ribosomal_L7Ae_CS.
[Graphical view]
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
PRINTSiPR00881. L7ARS6FAMILY.
PR00882. RIBOSOMALL7A.
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiPS01082. RIBOSOMAL_L7AE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL8_SCHPO
AccessioniPrimary (citable) accession number: O13672
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 23, 2007
Last modified: September 7, 2016
This is version 116 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.