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O13107 (O13107_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
BMP4 EMBL AAC60285.1
Gene names
Name:bmp4 ZFIN ZDB-GENE-980528-2059
Synonyms:BMP4 EMBL AAC60285.1
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAC60285.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length400 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the TGF-beta family. RuleBase RU000354

Sequences

Sequence LengthMass (Da)Tools
O13107 [UniParc].

Last modified July 1, 1997. Version 1.
Checksum: 427D1DB8FE12D025

FASTA40045,758
        10         20         30         40         50         60 
MIPGNRMLMV ILLCQVLLGE SSYASLIPEE GKKKASALHL AQSHELLRDF EATLLHMFGL 

        70         80         90        100        110        120 
QRRPRPSHSA VVPQYLLDLY RLQSGELEEA GAQHVSFDYP ERSTSRASTV RGFHHEEHLE 

       130        140        150        160        170        180 
ELQSDGSQET PLRFVFNLSS IPEDELISTA DVRIYRQQID DAFSDPDQTG DHGLHRINIY 

       190        200        210        220        230        240 
EVLKAPREGQ LITQLLDTRL VRPNTSKWES FDVSPAVLRW TQEKRSNHGL AVEVVQMKRN 

       250        260        270        280        290        300 
PVQKGRHARV SRSVHPLPNE EWDHVRPLLV TFGHDGKSHP LTRRAKRSPK QRGRKRNRNC 

       310        320        330        340        350        360 
RRHALYVDFS DVGWNDWIVA PPGYQAYYCH GECPFPLADH LNSTNHAIVQ TLVNSVNTNI 

       370        380        390        400 
PKWCCVPTEL SAISMLYLDE TDRVVLKNYQ EMVVEGCGCR

« Hide

References

[1]"Cloning and expression of three members of the zebrafish Bmp family: Bmp2a, Bmp2b and Bmp4."
Martinez-Barbera J.P., Toresson H., Da Rocha S., Krauss S.
Gene 198:53-59(1997) [PubMed: 9370264] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U82231 mRNA. Translation: AAC60285.1.
IPIIPI00503166.
UniGeneDr.567.

3D structure databases

HSSPHSSP built from PDB template 1ES7 based on UniProtKB P12643.
ProteinModelPortalO13107.
SMRO13107. Positions 299-400.
ModBaseSearch...

Protein-protein interaction databases

STRINGO13107.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

ZFINZDB-GENE-980528-2059. bmp4.

Phylogenomic databases

eggNOGfiNOG13688.
HOGENOMHBG717159.
HOVERGENHBG004860.
InParanoidO13107.
OrthoDBEOG4JT05K.

Gene expression databases

ArrayExpressO13107.
BgeeO13107.

Family and domain databases

InterProIPR002405. Inhibin_asu.
IPR001839. TGF-b_C.
IPR001111. TGF-b_N.
IPR015615. TGF-beta-rel.
IPR017948. TGFb_CS.
[Graphical view]
PANTHERPTHR11848. TGFbeta. 1 hit.
PfamPF00019. TGF_beta. 1 hit.
PF00688. TGFb_propeptide. 1 hit.
[Graphical view]
PRINTSPR00669. INHIBINA.
SMARTSM00204. TGFB. 1 hit.
[Graphical view]
PROSITEPS00250. TGF_BETA_1. 1 hit.
PS51362. TGF_BETA_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO13107_DANRE
AccessionPrimary (citable) accession number: O13107
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: January 25, 2012
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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