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Protein
Submitted name:

Axolotl fork head protein

Gene

AxFKH1

Organism
Ambystoma mexicanum (Axolotl)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TranscriptionSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Axolotl fork head proteinImported
Gene namesi
Name:AxFKH1Imported
OrganismiAmbystoma mexicanum (Axolotl)Imported
Taxonomic identifieri8296 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaCaudataSalamandroideaAmbystomatidaeAmbystoma

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliO13013.
SMRiO13013. Positions 133-223.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini133 – 22795Fork-head DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains fork-head DNA-binding domain.SAAS annotation

Phylogenomic databases

HOVERGENiHBG006621.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR013638. Fork-head_N.
IPR001766. Fork_head_dom.
IPR018533. Forkhead_box_C.
IPR030456. TF_fork_head_CS_2.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00250. Forkhead. 1 hit.
PF08430. Forkhead_N. 1 hit.
PF09354. HNF_C. 1 hit.
[Graphical view]
PRINTSiPR00053. FORKHEAD.
SMARTiSM00339. FH. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O13013-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNGIKLENQ EAMDWTHFYQ DNEVYSGVHS MPSSLASTYI PNDIHVASAG
60 70 80 90 100
MNYMNPGLGC SVPALPGGGS PVNSMAPGSL NIASPLNQSM NVAPQGSSSM
110 120 130 140 150
GSYTPMNTLA YGQGGLDYQR DPRAYRRNYS HAKPPYSYIS LITMAVQQSP
160 170 180 190 200
NKMMTLNEIY QWITDLFPYY RQNQQSWQNS IRHSLSFNDC FVKVPRSPEK
210 220 230 240 250
PGKGSYWALH PDSGNMFENG CYLRRQKRFK CDRRSGSKRV QDENGSHQPC
260 270 280 290 300
EAAIKPLILH LRAPTEFSNP FTRASAGLEH NHAMMSQQQP NMAASSPSIS
310 320 330 340 350
PASDQRHSPG QQLFHNLGPA NDDFLSHLGA EAHVKPETLS LCHPFSITNL
360 370 380 390 400
MSSEQQYHKM DLRQAHEQMM HYSGYSSASP VDFHPMSGKP GLDMPSISSD
410
PGPYYTSMYS RPLLSSL
Length:417
Mass (Da):46,382
Last modified:July 1, 1997 - v1
Checksum:iA17B28798EEC65B8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U43547 Genomic DNA. Translation: AAC60128.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U43547 Genomic DNA. Translation: AAC60128.1.

3D structure databases

ProteinModelPortaliO13013.
SMRiO13013. Positions 133-223.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG006621.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR013638. Fork-head_N.
IPR001766. Fork_head_dom.
IPR018533. Forkhead_box_C.
IPR030456. TF_fork_head_CS_2.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00250. Forkhead. 1 hit.
PF08430. Forkhead_N. 1 hit.
PF09354. HNF_C. 1 hit.
[Graphical view]
PRINTSiPR00053. FORKHEAD.
SMARTiSM00339. FH. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO13013_AMBME
AccessioniPrimary (citable) accession number: O13013
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: July 6, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.