UniProtKB - O13007 (O13007_ICTPU)
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Protein
POU domain protein
Gene
Oct-2
Organism
Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 299 – 358 | HomeoboxPROSITE-ProRule annotationAdd BLAST | 60 |
GO - Molecular functioni
- DNA binding transcription factor activity Source: AgBase
- enhancer sequence-specific DNA binding Source: AgBase
- transcription coactivator binding Source: AgBase
GO - Biological processi
- positive regulation of gene expression Source: AgBase
- positive regulation of transcription, DNA-templated Source: AgBase
- transcription, DNA-templated Source: UniProtKB-UniRule
Keywordsi
Molecular function | DNA-bindingPROSITE-ProRule annotationSAAS annotation |
Biological process | Transcription, Transcription regulationPROSITE-ProRule annotation |
Names & Taxonomyi
Protein namesi | Recommended name: POU domain proteinUniRule annotation |
Gene namesi | Name:Oct-2Imported Synonyms:oct2Imported, pou2f2Imported |
Organismi | Ictalurus punctatus (Channel catfish) (Silurus punctatus)Imported |
Taxonomic identifieri | 7998 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Siluriformes › Ictaluridae › Ictalurus |
Proteomesi |
|
Subcellular locationi
Keywords - Cellular componenti
NucleusPROSITE-ProRule annotationSAAS annotationFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 197 – 271 | POU-specificInterPro annotationAdd BLAST | 75 | |
Domaini | 297 – 357 | HomeoboxInterPro annotationAdd BLAST | 61 |
Sequence similaritiesi
Keywords - Domaini
HomeoboxPROSITE-ProRule annotationSAAS annotationPhylogenomic databases
HOVERGENi | HBG052783. |
KOi | K09364. |
Family and domain databases
CDDi | cd00086. homeodomain. 1 hit. |
InterProi | View protein in InterPro IPR009057. Homeobox-like_sf. IPR017970. Homeobox_CS. IPR001356. Homeobox_dom. IPR010982. Lambda_DNA-bd_dom_sf. IPR013847. POU. IPR000327. POU_dom. IPR000972. TF_octamer. |
Pfami | View protein in Pfam PF00046. Homeobox. 1 hit. PF00157. Pou. 1 hit. |
PRINTSi | PR00029. OCTAMER. PR00028. POUDOMAIN. |
SMARTi | View protein in SMART SM00389. HOX. 1 hit. SM00352. POU. 1 hit. |
SUPFAMi | SSF46689. SSF46689. 1 hit. SSF47413. SSF47413. 1 hit. |
PROSITEi | View protein in PROSITE PS00027. HOMEOBOX_1. 1 hit. PS50071. HOMEOBOX_2. 1 hit. PS00035. POU_1. 1 hit. PS00465. POU_2. 1 hit. PS51179. POU_3. 1 hit. |
i Sequence
Sequence statusi: Complete.
O13007-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MTKTAPIAAM DYSHLWLPDI RMSKPIEVEN PAADSPMENT GDSERNGSDS
60 70 80 90 100
NNQIPSMKIS PFSLSPTLSA SNKAKLEECG EMSPASVQAT PTQTPLSHTQ
110 120 130 140 150
LMLTGSQLAG DIQQLLQLQQ LVLVPGHPLS SPAQFLLPQA QQGQQGLLQT
160 170 180 190 200
PNLIPLPQQN QGGLLSAPPA LGLQAQQREK VMESSVSTVT PVTSHAEEPS
210 220 230 240 250
DLEELEQFAR TFKQRRIKLG FTQGDVGLAM GKLYGNDFSQ TTISRFEALN
260 270 280 290 300
LSFKNMCKLK PLLEKWLTDA ETMSMDSTLP SPSSLSSPSL GFEGLPARRR
310 320 330 340 350
KKRTSIETNV RVALERSFST NQKPTSEEIL LIAEQLNMEK EVIRVWFCNR
360 370 380 390 400
RQKEKRINPS SATPPLPSQP QPASHKPPCY SPHMMQGQGP SQPVTSLSTA
410 420 430 440 450
ATTMSSVCPL TPTGPSSSST PSPVTPSPRS DASPVPATHT LNLNTGSWRH
460 470 480
KNGDVSNYIT DFAANLSSGS QWWSNHHFQS
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | Y12652 mRNA. Translation: CAA73199.1. |
RefSeqi | NP_001187100.1. NM_001200171.1. |
UniGenei | Ipu.4476. Ipu.97180. |
Genome annotation databases
GeneIDi | 100304591. |
KEGGi | ipu:100304591. |
Similar proteinsi
Entry informationi
Entry namei | O13007_ICTPU | |
Accessioni | O13007Primary (citable) accession number: O13007 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 1, 1997 |
Last sequence update: | July 1, 1997 | |
Last modified: | March 28, 2018 | |
This is version 108 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |