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Protein
Submitted name:

Snail like protein

Gene

SNAI1

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Snail like proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SNAI1Imported
OrganismiGallus gallus (Chicken)
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 20

Subcellular locationi

GO - Cellular componenti

  • cell Source: AgBase
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSGALG00000008018.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000012995.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini116 – 14328C2H2-typeInterPro annotationAdd
BLAST
Domaini147 – 17024C2H2-typeInterPro annotationAdd
BLAST
Domaini173 – 20028C2H2-typeInterPro annotationAdd
BLAST
Domaini201 – 22828C2H2-typeInterPro annotationAdd
BLAST
Domaini229 – 25628C2H2-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2462. Eukaryota.
ENOG41106JS. LUCA.
GeneTreeiENSGT00390000011027.
HOGENOMiHOG000261665.
HOVERGENiHBG007477.
KOiK05706.
OMAiHCDSQAR.
OrthoDBiEOG091G0Q0V.
PhylomeDBiO12939.
TreeFamiTF315515.

Family and domain databases

Gene3Di3.30.160.60. 3 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 2 hits.
PF13912. zf-C2H2_6. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 5 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 4 hits.
PS50157. ZINC_FINGER_C2H2_2. 5 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O12939-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRSFLVKKH FSASKKPNYS ELESQTVLAA PLLYETCALS VIPPPEVLGP
60 70 80 90 100
GAYYPPLVWD AGLLSSLFPA GLGTEAEAAG GAAPALDLTT LSSEEDEGKS
110 120 130 140 150
SGPPSPASAP AAAERFRCAQ CAKAYSTFAG LSKHKQLHCD AQTRKSFSCK
160 170 180 190 200
YCEKEYVSLG ALKMHIRSHT LPCVCKMCGK AFSRPWLLQG HIRTHTGEKP
210 220 230 240 250
FSCTHCNRAF ADRSNLRAHL QTHSDVKKYQ CKTCSRTFSR MSLLHKHEET

GCSGAR
Length:256
Mass (Da):27,866
Last modified:July 1, 1997 - v1
Checksum:i1D0F8CC8D35B1EEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN03007775 Genomic DNA. No translation available.
Y09905 mRNA. Translation: CAA71033.1.
RefSeqiNP_990473.1. NM_205142.1.
UniGeneiGga.3851.

Genome annotation databases

EnsembliENSGALT00000013010; ENSGALP00000012995; ENSGALG00000008018.
GeneIDi396047.
KEGGigga:396047.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN03007775 Genomic DNA. No translation available.
Y09905 mRNA. Translation: CAA71033.1.
RefSeqiNP_990473.1. NM_205142.1.
UniGeneiGga.3851.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000012995.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSGALT00000013010; ENSGALP00000012995; ENSGALG00000008018.
GeneIDi396047.
KEGGigga:396047.

Organism-specific databases

CTDi6615.

Phylogenomic databases

eggNOGiKOG2462. Eukaryota.
ENOG41106JS. LUCA.
GeneTreeiENSGT00390000011027.
HOGENOMiHOG000261665.
HOVERGENiHBG007477.
KOiK05706.
OMAiHCDSQAR.
OrthoDBiEOG091G0Q0V.
PhylomeDBiO12939.
TreeFamiTF315515.

Gene expression databases

BgeeiENSGALG00000008018.

Family and domain databases

Gene3Di3.30.160.60. 3 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 2 hits.
PF13912. zf-C2H2_6. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 5 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 4 hits.
PS50157. ZINC_FINGER_C2H2_2. 5 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO12939_CHICK
AccessioniPrimary (citable) accession number: O12939
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: September 7, 2016
This is version 118 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.