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O12288 (O12288_9PHYC) Unreviewed, UniProtKB/TrEMBL

Last modified April 5, 2011. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
VChta-1 protein EMBL BAA20342.1
Gene names
Name:vChta-1 EMBL BAA20342.1
OrganismChlorella virus EMBL BAA20342.1
Taxonomic identifier10507 [NCBI]
Taxonomic lineageViruses › dsDNA viruses, no RNA stage › Phycodnaviridae › Chlorovirus › unclassified Chlorovirus

Protein attributes

Sequence length328 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionchitosanase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O12288 [UniParc].

Last modified July 1, 1997. Version 1.
Checksum: 0B4FF1D864221F9C

FASTA32836,728
        10         20         30         40         50         60 
MSNKIEITDD NKMTIQNDFV SRMMKSIDQE LVAMTNKYSG FGPGRQTNCK KALAKALGET 

        70         80         90        100        110        120 
PVNPPVNPPV TPPVDTHIPS QVEAPLKKLG FNTTNADTIL SLIALPENST TQWWKNYNYA 

       130        140        150        160        170        180 
SCLKDGRGWT VTIYGACSGT GDLLMVLESL QKINPNHPLV KFIPAMRKTK GDDIRGLENL 

       190        200        210        220        230        240 
GKVINGLGDD KEWQTAVWDI YVKLYWTFAA DFSDKTGSAK NRPGPVMTSP LTRGFMVDVA 

       250        260        270        280        290        300 
LNHGSNMESF SDILKRMKNK DEKDEAKWFL DFCETRRKLL KSGFQDLDTS KTGDRAILWS 

       310        320 
ELFKTGNVGL KRPIKCYNGY WGKNIVIS

« Hide

References

[1]"Alternative expression of a chitosanase gene produces two different proteins in cells infected with Chlorella virus CVK2."
Yamada T., Hiramatsu S., Songsri P., Fujie M.
Virology 230:361-368(1997) [PubMed: 9143292] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CVK2 EMBL BAA20342.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		D88191 Genomic DNA. Translation: BAA20342.1.

3D structure databases

ProteinModelPortalO12288.
ModBaseSearch...

Protein family/group databases

CAZyGH46. Glycoside Hydrolase Family 46.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR000400. Glyco_hydro_46.
IPR023099. Glyco_hydro_46_N.
IPR023346. Lysozyme-like_dom.
[Graphical view]
Gene3DG3DSA:3.30.386.10. Glyco_hydro_46_N. 1 hit.
PfamPF01374. Glyco_hydro_46. 1 hit.
[Graphical view]
PIRSFPIRSF036551. Chitosanase. 1 hit.
SUPFAMSSF53955. SSF53955. 1 hit.
PROSITEPS60000. CHITOSANASE_46_80. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO12288_9PHYC
AccessionPrimary (citable) accession number: O12288
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: April 5, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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