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Protein

Gag polyprotein

Gene

gag

Organism
Simian T-lymphotropic virus 3
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Gag polyproteinSAAS annotation
Gene namesi
Name:gagImported
OrganismiSimian T-lymphotropic virus 3Imported
Taxonomic identifieri39101 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeDeltaretrovirus

Subcellular locationi

  • Virion SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

Capsid proteinSAAS annotation, Virion

Structurei

3D structure databases

ProteinModelPortaliO12272
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini352 – 367CCHC-typeInterPro annotationAdd BLAST16

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di1.10.1200.30, 1 hit
1.10.375.10, 1 hit
InterProiView protein in InterPro
IPR003139 D_retro_matrix
IPR000721 Gag_p24
IPR008916 Retrov_capsid_C
IPR008919 Retrov_capsid_N
IPR010999 Retrovr_matrix
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF02228 Gag_p19, 1 hit
PF00607 Gag_p24, 1 hit
PF00098 zf-CCHC, 1 hit
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 2 hits
SUPFAMiSSF47836 SSF47836, 1 hit
SSF47943 SSF47943, 1 hit
SSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 1 hit

Sequencei

Sequence statusi: Complete.

O12272-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKTYSSPAN PIPKAPKGLA IHHWLNFLQA AYRLQPGPSE FDFHQLRKFL
60 70 80 90 100
KLAIKTPVWL NPINYSVLAG LIPKNYPGRV HEIVAILIQE TPARETPPSA
110 120 130 140 150
PLADDPQKPP PYPEQVQTAP QCLPVLHPHG APAAHRPWQM KDLQAIKQDV
160 170 180 190 200
SSSAPGSLQF MQTVRLAVQQ FDPTAKDLHD LLQYLCSSLV ASYLHHQQLE
210 220 230 240 250
TLIAQAETQG ITGYNPLAGP LRVQANNPNQ QGLRREYQSL WLSAFSALPG
260 270 280 290 300
NTKDPTWAAI LQGPEEPFCS FVERLNVALD NGLPEGTPKD PILRSLAYSN
310 320 330 340 350
ANKECQKLLQ ARGQTNSPLG EMLRACQTWT PRDKSKILMI QPKKTPPPNQ
360 370 380 390 400
PCFRCGQAGH WSRDCKQPRP PPGPCPLCQD PAHWKRDCPQ LKADTKGNEN
410 420
LLLDLPCETS NARERKNSSG GED
Length:423
Mass (Da):46,934
Last modified:July 1, 1997 - v1
Checksum:i8692CF9F003F8153
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y07616 Genomic RNA Translation: CAA68892.1

Similar proteinsi

Entry informationi

Entry nameiO12272_9DELA
AccessioniPrimary (citable) accession number: O12272
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: March 28, 2018
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health