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Protein

60S ribosomal protein L21

Gene

Rpl21

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L21
Gene namesi
Name:Rpl21
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Unplaced

Organism-specific databases

MGIiMGI:1278340. Rpl21.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 16015960S ribosomal protein L21PRO_0000149670Add
BLAST

Proteomic databases

EPDiO09167.
MaxQBiO09167.
PaxDbiO09167.
PRIDEiO09167.

PTM databases

iPTMnetiO09167.
PhosphoSiteiO09167.

Expressioni

Gene expression databases

CleanExiMM_RPL21.

Interactioni

Protein-protein interaction databases

IntActiO09167. 1 interaction.
MINTiMINT-1858045.
STRINGi10090.ENSMUSP00000041652.

Structurei

3D structure databases

ProteinModelPortaliO09167.
SMRiO09167. Positions 2-160.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L21e family.Curated

Phylogenomic databases

eggNOGiKOG1732. Eukaryota.
COG2139. LUCA.
HOGENOMiHOG000194513.
HOVERGENiHBG001518.
InParanoidiO09167.
PhylomeDBiO09167.

Family and domain databases

Gene3Di2.30.30.70. 1 hit.
InterProiIPR001147. Ribosomal_L21e.
IPR018259. Ribosomal_L21e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR20981. PTHR20981. 1 hit.
PfamiPF01157. Ribosomal_L21e. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01171. RIBOSOMAL_L21E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O09167-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNTKGKRRG TRYMFSRPFR KHGVVPLATY MRIYKKGDIV DIKGMGTVQK
60 70 80 90 100
GMPHKCYHGK TGRVYNVTQH AVGIIVNKQV KGKILAKRIN VRIEHIKHSK
110 120 130 140 150
SRDSFLKRVK ENDQKKKEAK EKGTWVQLKR HAAPPREAHF VRTNGKEPEL
160
LEPIPYEFMA
Length:160
Mass (Da):18,562
Last modified:January 23, 2007 - v3
Checksum:i74F215B19EA63CAB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U93863 mRNA. Translation: AAB52255.1.
UniGeneiMm.316592.
Mm.371575.
Mm.440507.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U93863 mRNA. Translation: AAB52255.1.
UniGeneiMm.316592.
Mm.371575.
Mm.440507.

3D structure databases

ProteinModelPortaliO09167.
SMRiO09167. Positions 2-160.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiO09167. 1 interaction.
MINTiMINT-1858045.
STRINGi10090.ENSMUSP00000041652.

PTM databases

iPTMnetiO09167.
PhosphoSiteiO09167.

Proteomic databases

EPDiO09167.
MaxQBiO09167.
PaxDbiO09167.
PRIDEiO09167.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:1278340. Rpl21.

Phylogenomic databases

eggNOGiKOG1732. Eukaryota.
COG2139. LUCA.
HOGENOMiHOG000194513.
HOVERGENiHBG001518.
InParanoidiO09167.
PhylomeDBiO09167.

Miscellaneous databases

PROiO09167.
SOURCEiSearch...

Gene expression databases

CleanExiMM_RPL21.

Family and domain databases

Gene3Di2.30.30.70. 1 hit.
InterProiIPR001147. Ribosomal_L21e.
IPR018259. Ribosomal_L21e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR20981. PTHR20981. 1 hit.
PfamiPF01157. Ribosomal_L21e. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01171. RIBOSOMAL_L21E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Rocha D., Anderson E., Botcherby M., Jordan B.
    Submitted (APR-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: C57BL/6J.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Brain, Brown adipose tissue, Heart, Kidney, Liver, Lung, Pancreas, Spleen and Testis.

Entry informationi

Entry nameiRL21_MOUSE
AccessioniPrimary (citable) accession number: O09167
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: January 23, 2007
Last modified: May 11, 2016
This is version 97 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.