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Protein

Probasin

Gene

Pbsn

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Probasin
Short name:
PB
Gene namesi
Name:Pbsn
Synonyms:Prbs
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome X

Organism-specific databases

MGIiMGI:1860484. Pbsn.

Subcellular locationi

GO - Cellular componenti

  • extracellular region Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818By similarityAdd
BLAST
Chaini19 – 174156ProbasinPRO_0000017954Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi77 ↔ 168By similarity

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiO08976.
PRIDEiO08976.

PTM databases

PhosphoSiteiO08976.

Expressioni

Gene expression databases

BgeeiO08976.
CleanExiMM_PBSN.
ExpressionAtlasiO08976. baseline and differential.
GenevisibleiO08976. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000000003.

Structurei

3D structure databases

ProteinModelPortaliO08976.
SMRiO08976. Positions 25-169.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the calycin superfamily. Lipocalin family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410JFM0. Eukaryota.
ENOG4111E4N. LUCA.
HOGENOMiHOG000049215.
HOVERGENiHBG098951.
InParanoidiO08976.
OMAiFRRIECG.
OrthoDBiEOG7CK38Q.
PhylomeDBiO08976.
TreeFamiTF338197.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
IPR002448. Odour-bd.
[Graphical view]
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR01173. ODORANTBNDNG.
SUPFAMiSSF50814. SSF50814. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O08976-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMRVIILLLT LHVLGVSSVM SLKKKIDGPW QTIYLAASTM EKINEGSPLR
60 70 80 90 100
TYFRHILCGR RCNQVYLYFF IKKGTKCQLY KVIGRKKQEV YYAQYEGSIA
110 120 130 140 150
FMLKMVNEKI LLFHYFNKNR RNDVTRVAGV LAKGKQLNKE EMTEFMNLVE
160 170
EMGIEEENVQ RIMDTDNCPS KIKP
Length:174
Mass (Da):20,372
Last modified:June 1, 1998 - v2
Checksum:i62CE0B046F7106C3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF005204 mRNA. Translation: AAC01954.1.
CCDSiCCDS30249.1.
RefSeqiNP_059499.1. NM_017471.2.
UniGeneiMm.8034.

Genome annotation databases

EnsembliENSMUST00000000003; ENSMUSP00000000003; ENSMUSG00000000003.
GeneIDi54192.
KEGGimmu:54192.
UCSCiuc009tqr.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF005204 mRNA. Translation: AAC01954.1.
CCDSiCCDS30249.1.
RefSeqiNP_059499.1. NM_017471.2.
UniGeneiMm.8034.

3D structure databases

ProteinModelPortaliO08976.
SMRiO08976. Positions 25-169.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000000003.

PTM databases

PhosphoSiteiO08976.

Proteomic databases

PaxDbiO08976.
PRIDEiO08976.

Protocols and materials databases

DNASUi54192.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000000003; ENSMUSP00000000003; ENSMUSG00000000003.
GeneIDi54192.
KEGGimmu:54192.
UCSCiuc009tqr.1. mouse.

Organism-specific databases

CTDi54192.
MGIiMGI:1860484. Pbsn.

Phylogenomic databases

eggNOGiENOG410JFM0. Eukaryota.
ENOG4111E4N. LUCA.
HOGENOMiHOG000049215.
HOVERGENiHBG098951.
InParanoidiO08976.
OMAiFRRIECG.
OrthoDBiEOG7CK38Q.
PhylomeDBiO08976.
TreeFamiTF338197.

Miscellaneous databases

NextBioi311030.
PROiO08976.
SOURCEiSearch...

Gene expression databases

BgeeiO08976.
CleanExiMM_PBSN.
ExpressionAtlasiO08976. baseline and differential.
GenevisibleiO08976. MM.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
IPR002448. Odour-bd.
[Graphical view]
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR01173. ODORANTBNDNG.
SUPFAMiSSF50814. SSF50814. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Cloning and characterization of the mouse probasin cDNA."
    Johnson M.A., Greenberg N.M.
    Submitted (FEB-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: C57BL/6J.
    Tissue: Prostate.

Entry informationi

Entry nameiPBAS_MOUSE
AccessioniPrimary (citable) accession number: O08976
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: June 1, 1998
Last modified: May 11, 2016
This is version 115 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.