ID ERCC2_MOUSE Reviewed; 760 AA. AC O08811; Q8C487; Q9DC01; DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot. DT 27-JUL-2011, sequence version 2. DT 27-MAR-2024, entry version 187. DE RecName: Full=General transcription and DNA repair factor IIH helicase subunit XPD; DE Short=TFIIH subunit XPD; DE EC=3.6.4.12; DE AltName: Full=CXPD; DE AltName: Full=DNA excision repair protein ERCC-2; DE AltName: Full=DNA repair protein complementing XP-D cells; DE AltName: Full=Xeroderma pigmentosum group D-complementing protein; GN Name=Ercc2; Synonyms=Xpd; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. OX NCBI_TaxID=10090; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA]. RX PubMed=9426063; RA de Boer J., Donker I., de Wit J., Hoeijmakers J.H.J., Weeda G.; RT "Disruption of the mouse xeroderma pigmentosum group D DNA repair/basal RT transcription gene results in preimplantation lethality."; RL Cancer Res. 58:89-94(1998). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=C57BL/6J; TISSUE=Lung; RX PubMed=16141072; DOI=10.1126/science.1112014; RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J., RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.; RT "The transcriptional landscape of the mammalian genome."; RL Science 309:1559-1563(2005). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.; RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases. RN [4] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RC TISSUE=Testis; RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001; RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.; RT "A tissue-specific atlas of mouse protein phosphorylation and expression."; RL Cell 143:1174-1189(2010). CC -!- FUNCTION: ATP-dependent 5'-3' DNA helicase, component of the general CC transcription and DNA repair factor IIH (TFIIH) core complex, which is CC involved in general and transcription-coupled nucleotide excision CC repair (NER) of damaged DNA and, when complexed to CAK, in RNA CC transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA CC around the lesion to allow the excision of the damaged oligonucleotide CC and its replacement by a new DNA fragment. The ATP-dependent helicase CC activity of XPD/ERCC2 is required for DNA opening. In transcription, CC TFIIH has an essential role in transcription initiation. When the pre- CC initiation complex (PIC) has been established, TFIIH is required for CC promoter opening and promoter escape. Phosphorylation of the C-terminal CC tail (CTD) of the largest subunit of RNA polymerase II by the kinase CC module CAK controls the initiation of transcription. XPD/ERCC2 acts by CC forming a bridge between CAK and the core-TFIIH complex. Involved in CC the regulation of vitamin-D receptor activity. As part of the mitotic CC spindle-associated MMXD complex it plays a role in chromosome CC segregation. Might have a role in aging process and could play a CC causative role in the generation of skin cancers. CC {ECO:0000250|UniProtKB:P18074}. CC -!- CATALYTIC ACTIVITY: CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065, CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12; CC -!- COFACTOR: CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250}; CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Evidence={ECO:0000250}; CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000250}; CC -!- SUBUNIT: Component of the 7-subunit TFIIH core complex composed of CC XPB/ERCC3, XPD/ERCC2, GTF2H1, GTF2H2, GTF2H3, GTF2H4 and GTF2H5, which CC is active in NER. The core complex associates with the 3-subunit CDK- CC activating kinase (CAK) module composed of CCNH/cyclin H, CDK7 and CC MNAT1 to form the 10-subunit holoenzyme (holo-TFIIH) active in CC transcription. The interaction with GTF2H2 results in the stimulation CC of the 5'-->3' helicase activity. Component of the MMXD complex, which CC includes CIAO1, ERCC2, CIAO2B, MMS19 and SLC25A5. Interacts with CIAO1 CC and CIAO2B; the interaction WITH CIAO2B is direct. Interacts with CC ATF7IP. Interacts directly with MMS19. Part of TBP-based Pol II pre- CC initiation complex (PIC), in which Pol II core assembles with general CC transcription factors and other specific initiation factors including CC GTF2E1, GTF2E2, GTF2F1, GTF2F2, TCEA1, ERCC2, ERCC3, GTF2H2, GTF2H3, CC GTF2H4, GTF2H5, GTF2A1, GTF2A2, GTF2B and TBP; this large multi-subunit CC PIC complex mediates DNA unwinding and targets Pol II core to the CC transcription start site where the first phosphodiester bond forms. CC {ECO:0000250|UniProtKB:P18074}. CC -!- SUBCELLULAR LOCATION: Nucleus. Cytoplasm, cytoskeleton, spindle CC {ECO:0000250}. CC -!- PTM: ISGylated. {ECO:0000250}. CC -!- SIMILARITY: Belongs to the helicase family. RAD3/XPD subfamily. CC {ECO:0000305}. CC -!- SEQUENCE CAUTION: CC Sequence=BAB23443.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305}; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; U97572; AAB58296.1; -; mRNA. DR EMBL; AK004652; BAB23443.1; ALT_INIT; mRNA. DR EMBL; AK082761; BAC38607.1; -; mRNA. DR EMBL; CH466639; EDL23140.1; -; Genomic_DNA. DR CCDS; CCDS20900.1; -. DR RefSeq; NP_031975.2; NM_007949.4. DR AlphaFoldDB; O08811; -. DR SMR; O08811; -. DR BioGRID; 199500; 1. DR IntAct; O08811; 1. DR MINT; O08811; -. DR STRING; 10090.ENSMUSP00000054380; -. DR iPTMnet; O08811; -. DR PhosphoSitePlus; O08811; -. DR SwissPalm; O08811; -. DR EPD; O08811; -. DR MaxQB; O08811; -. DR PaxDb; 10090-ENSMUSP00000054380; -. DR ProteomicsDB; 275672; -. DR Pumba; O08811; -. DR Antibodypedia; 17895; 315 antibodies from 37 providers. DR DNASU; 13871; -. DR Ensembl; ENSMUST00000062831.16; ENSMUSP00000054380.10; ENSMUSG00000030400.18. DR GeneID; 13871; -. DR KEGG; mmu:13871; -. DR UCSC; uc009flq.1; mouse. DR AGR; MGI:95413; -. DR CTD; 2068; -. DR MGI; MGI:95413; Ercc2. DR VEuPathDB; HostDB:ENSMUSG00000030400; -. DR eggNOG; KOG1131; Eukaryota. DR GeneTree; ENSGT00950000182970; -. DR InParanoid; O08811; -. DR OMA; IREQFFR; -. DR OrthoDB; 124793at2759; -. DR PhylomeDB; O08811; -. DR TreeFam; TF101232; -. DR Reactome; R-MMU-112382; Formation of RNA Pol II elongation complex. DR Reactome; R-MMU-113418; Formation of the Early Elongation Complex. DR Reactome; R-MMU-5696395; Formation of Incision Complex in GG-NER. DR Reactome; R-MMU-5696400; Dual Incision in GG-NER. DR Reactome; R-MMU-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-MMU-6781823; Formation of TC-NER Pre-Incision Complex. DR Reactome; R-MMU-6782135; Dual incision in TC-NER. DR Reactome; R-MMU-6782210; Gap-filling DNA repair synthesis and ligation in TC-NER. DR Reactome; R-MMU-6796648; TP53 Regulates Transcription of DNA Repair Genes. DR Reactome; R-MMU-72086; mRNA Capping. DR Reactome; R-MMU-73762; RNA Polymerase I Transcription Initiation. DR Reactome; R-MMU-73772; RNA Polymerase I Promoter Escape. DR Reactome; R-MMU-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-MMU-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-MMU-73863; RNA Polymerase I Transcription Termination. DR Reactome; R-MMU-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-MMU-75955; RNA Polymerase II Transcription Elongation. DR Reactome; R-MMU-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Reactome; R-MMU-77075; RNA Pol II CTD phosphorylation and interaction with CE. DR BioGRID-ORCS; 13871; 32 hits in 120 CRISPR screens. DR PRO; PR:O08811; -. DR Proteomes; UP000000589; Chromosome 7. DR RNAct; O08811; Protein. DR Bgee; ENSMUSG00000030400; Expressed in spermatocyte and 152 other cell types or tissues. DR ExpressionAtlas; O08811; baseline and differential. DR GO; GO:0070516; C:CAK-ERCC2 complex; ISO:MGI. DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB. DR GO; GO:0005829; C:cytosol; ISO:MGI. DR GO; GO:0071817; C:MMXD complex; ISS:UniProtKB. DR GO; GO:0005654; C:nucleoplasm; ISO:MGI. DR GO; GO:0005634; C:nucleus; IDA:MGI. DR GO; GO:0005819; C:spindle; ISS:UniProtKB. DR GO; GO:0005669; C:transcription factor TFIID complex; ISO:MGI. DR GO; GO:0000439; C:transcription factor TFIIH core complex; ISO:MGI. DR GO; GO:0005675; C:transcription factor TFIIH holo complex; ISS:UniProtKB. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW. DR GO; GO:0043139; F:5'-3' DNA helicase activity; ISS:UniProtKB. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA. DR GO; GO:0003684; F:damaged DNA binding; IBA:GO_Central. DR GO; GO:0003678; F:DNA helicase activity; IBA:GO_Central. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0030674; F:protein-macromolecule adaptor activity; ISO:MGI. DR GO; GO:0006915; P:apoptotic process; ISS:UniProtKB. DR GO; GO:0030282; P:bone mineralization; IMP:MGI. DR GO; GO:0032289; P:central nervous system myelin formation; IMP:MGI. DR GO; GO:0007059; P:chromosome segregation; ISS:UniProtKB. DR GO; GO:0008340; P:determination of adult lifespan; IMP:MGI. DR GO; GO:0006281; P:DNA repair; IMP:MGI. DR GO; GO:0040016; P:embryonic cleavage; IMP:MGI. DR GO; GO:0048568; P:embryonic organ development; IEA:Ensembl. DR GO; GO:0043249; P:erythrocyte maturation; IMP:MGI. DR GO; GO:0030198; P:extracellular matrix organization; IMP:MGI. DR GO; GO:0035315; P:hair cell differentiation; IMP:MGI. DR GO; GO:0022405; P:hair cycle process; IMP:MGI. DR GO; GO:0048820; P:hair follicle maturation; IMP:MGI. DR GO; GO:0060218; P:hematopoietic stem cell differentiation; IMP:MGI. DR GO; GO:0071425; P:hematopoietic stem cell proliferation; IMP:MGI. DR GO; GO:0001701; P:in utero embryonic development; IMP:MGI. DR GO; GO:0048009; P:insulin-like growth factor receptor signaling pathway; IMP:MGI. DR GO; GO:0072332; P:intrinsic apoptotic signaling pathway by p53 class mediator; IMP:MGI. DR GO; GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:MGI. DR GO; GO:0035264; P:multicellular organism growth; IMP:MGI. DR GO; GO:0006289; P:nucleotide-excision repair; IMP:MGI. DR GO; GO:0045951; P:positive regulation of mitotic recombination; IBA:GO_Central. DR GO; GO:0009791; P:post-embryonic development; IMP:MGI. DR GO; GO:1901990; P:regulation of mitotic cell cycle phase transition; ISO:MGI. DR GO; GO:0001666; P:response to hypoxia; IEA:Ensembl. DR GO; GO:0006979; P:response to oxidative stress; IMP:MGI. DR GO; GO:0009411; P:response to UV; IMP:MGI. DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IMP:MGI. DR GO; GO:0043588; P:skin development; IMP:MGI. DR GO; GO:0021510; P:spinal cord development; IMP:MGI. DR GO; GO:0006366; P:transcription by RNA polymerase II; ISS:UniProtKB. DR GO; GO:0006362; P:transcription elongation by RNA polymerase I; IMP:MGI. DR GO; GO:0006283; P:transcription-coupled nucleotide-excision repair; ISS:UniProtKB. DR GO; GO:0009650; P:UV protection; IMP:MGI. DR CDD; cd17969; DEAHc_XPD; 1. DR CDD; cd18788; SF2_C_XPD; 1. DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2. DR InterPro; IPR006555; ATP-dep_Helicase_C. DR InterPro; IPR045028; DinG/Rad3-like. DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS. DR InterPro; IPR010643; HBB. DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3. DR InterPro; IPR006554; Helicase-like_DEXD_c2. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR010614; RAD3-like_helicase_DEAD. DR InterPro; IPR013020; Rad3/Chl1-like. DR InterPro; IPR001945; RAD3/XPD. DR NCBIfam; TIGR00604; rad3; 1. DR PANTHER; PTHR11472; DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER; 1. DR PANTHER; PTHR11472:SF1; GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPD; 1. DR Pfam; PF06733; DEAD_2; 1. DR Pfam; PF06777; HBB; 1. DR Pfam; PF13307; Helicase_C_2; 1. DR PRINTS; PR00852; XRODRMPGMNTD. DR SMART; SM00488; DEXDc2; 1. DR SMART; SM00491; HELICc2; 1. DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1. DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1. DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1. DR Genevisible; O08811; MM. PE 1: Evidence at protein level; KW 4Fe-4S; ATP-binding; Chromosome partition; Cytoplasm; Cytoskeleton; KW DNA damage; DNA repair; DNA-binding; Helicase; Hydrolase; Iron; KW Iron-sulfur; Magnesium; Metal-binding; Nucleotide-binding; Nucleus; KW Reference proteome; Transcription; Transcription regulation; KW Ubl conjugation. FT CHAIN 1..760 FT /note="General transcription and DNA repair factor IIH FT helicase subunit XPD" FT /id="PRO_0000101981" FT DOMAIN 7..283 FT /note="Helicase ATP-binding" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541" FT REGION 438..637 FT /note="Mediates interaction with MMS19" FT /evidence="ECO:0000250" FT MOTIF 234..237 FT /note="DEAH box" FT BINDING 42..49 FT /ligand="ATP" FT /ligand_id="ChEBI:CHEBI:30616" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541" FT BINDING 116 FT /ligand="[4Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:49883" FT /evidence="ECO:0000250" FT BINDING 134 FT /ligand="[4Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:49883" FT /evidence="ECO:0000250" FT BINDING 155 FT /ligand="[4Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:49883" FT /evidence="ECO:0000250" FT BINDING 190 FT /ligand="[4Fe-4S] cluster" FT /ligand_id="ChEBI:CHEBI:49883" FT /evidence="ECO:0000250" FT CONFLICT 285 FT /note="Y -> C (in Ref. 2; BAB23443)" FT /evidence="ECO:0000305" FT CONFLICT 595 FT /note="I -> V (in Ref. 1; AAB58296)" FT /evidence="ECO:0000305" SQ SEQUENCE 760 AA; 86842 MW; 02B2E116792D4E44 CRC64; MKLNVDGLLV YFPYDYIYPE QFSYMLELKR TLDAKGHGVL EMPSGTGKTV SLLALIVAYQ RAYPLEVTKL IYCSRTVPEI EKVIEELRKL LSFYEQQEGE KLPFLGLALS SRKNLCIHPE VTPLRFGKDV DGKCHSLTAS YVRAQYQQDA SLPHCRFYEE FDIHGRQMPL PAGIYNLDDL KALGQRQGWC PYFLARYSIL HANVVVYSYH YLLDPKIADL VSKELARKAV VVFDEAHNID NVCIDSMSVN LTRRTLDRCQ SNLDTLQKTV LRIKETDEQR LRDEYRRLVE GLREASVARE TDAHLANPVL PDEVLQEAVP GSIRTAEHFL GFLRRLLEYV KWRLRVQHVV QESPPAFLSG LAQRVCIQRK PLRFCAERLR SLLHTLEIAD LADFSPLTLL ANFATLVSTY AKGFTIIIEP FDDRTPTIAN PVLHFSCMDA SLAIKPVFER FQSVIITSGT LSPLDIYPKI LDFHPVTMAT FTMTLARVCL CPMIIGRGND QVAISSKFET REDIAVIRNY GNLLLEMSAV VPDGIVAFFT SYQYMESTVA SWYEQGILEN IQRNKLLFIE TQDGAETSVA LEKYQEACEN GRGAILLSVA RGKVSEGIDF VHHYGRAVIM FGVPYVYTQS RILKARLEYL RDQFQIREND FLTFDAMRHA AQCVGRAIRG KTDYGLMVFA DKRFARADKR GKLPRWIQEH LTDSNLNLTV DEGVQVAKYF LRQMAQPFHR EDQLGLSLLS LEQLQSEETL QRIEQIAQQL //