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Protein

Fatty acid-binding protein 9

Gene

Fabp9

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

Lipid-binding

Enzyme and pathway databases

ReactomeiR-MMU-163560. Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis.

Names & Taxonomyi

Protein namesi
Recommended name:
Fatty acid-binding protein 9
Alternative name(s):
15 kDa perforatorial protein
Short name:
PERF 15
Testis lipid-binding protein
Short name:
TLBP
Testis-type fatty acid-binding protein
Short name:
T-FABP
Gene namesi
Name:Fabp9
Synonyms:Perf15, Tlbp
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 3

Organism-specific databases

MGIiMGI:1194881. Fabp9.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 132132Fatty acid-binding protein 9PRO_0000067385Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei13 – 131PhosphoserineBy similarity
Modified residuei14 – 141PhosphoserineBy similarity
Modified residuei40 – 401PhosphoserineBy similarity
Modified residuei42 – 421PhosphoserineBy similarity
Modified residuei44 – 441PhosphoserineBy similarity
Modified residuei91 – 911PhosphoserineBy similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiO08716.
PeptideAtlasiO08716.
PRIDEiO08716.

2D gel databases

REPRODUCTION-2DPAGEIPI00396813.

PTM databases

iPTMnetiO08716.
PhosphoSiteiO08716.

Expressioni

Tissue specificityi

Testis.

Gene expression databases

BgeeiO08716.
CleanExiMM_FABP9.
ExpressionAtlasiO08716. baseline and differential.
GenevisibleiO08716. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000029038.

Structurei

3D structure databases

ProteinModelPortaliO08716.
SMRiO08716. Positions 1-131.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG4015. Eukaryota.
ENOG4111US8. LUCA.
GeneTreeiENSGT00760000118898.
HOGENOMiHOG000004829.
HOVERGENiHBG005633.
InParanoidiO08716.
OrthoDBiEOG7NW6BZ.
PhylomeDBiO08716.
TreeFamiTF316894.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000463. Fatty_acid-bd.
IPR031259. iLBP.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
[Graphical view]
PANTHERiPTHR11955. PTHR11955. 1 hit.
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR00178. FATTYACIDBP.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00214. FABP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O08716-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIEPFLGTWK LISSENFENY VRELGVECEP RKVACLIKPS VSISFNGERM
60 70 80 90 100
DIQAGSACRN TEISFKLGEE FEETTADNRK VKSLITFEGG SMIQVQKWLG
110 120 130
KQTTIKRKIV DGKMVVECTM NNVVSTRIYE RV
Length:132
Mass (Da):15,017
Last modified:February 5, 2008 - v2
Checksum:iD52B2279F0A7E272
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti12 – 121I → V in AAB53798 (PubMed:9408250).Curated
Sequence conflicti62 – 621E → K in AAB53798 (PubMed:9408250).Curated
Sequence conflicti95 – 951V → I in AAB53798 (PubMed:9408250).Curated
Sequence conflicti97 – 971K → R in AAB53798 (PubMed:9408250).Curated
Sequence conflicti108 – 1081K → R in AAB53798 (PubMed:9408250).Curated
Sequence conflicti113 – 1131K → R in AAB53798 (PubMed:9408250).Curated
Sequence conflicti128 – 1281I → T in AAB53798 (PubMed:9408250).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U96149 mRNA. Translation: AAB53798.1.
AK005745 mRNA. Translation: BAB24218.1.
AK161314 mRNA. Translation: BAE36318.1.
BC048437 mRNA. Translation: AAH48437.1.
CCDSiCCDS17237.1.
RefSeqiNP_035728.2. NM_011598.3.
UniGeneiMm.26654.

Genome annotation databases

EnsembliENSMUST00000029038; ENSMUSP00000029038; ENSMUSG00000027528.
GeneIDi21884.
KEGGimmu:21884.
UCSCiuc008opj.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U96149 mRNA. Translation: AAB53798.1.
AK005745 mRNA. Translation: BAB24218.1.
AK161314 mRNA. Translation: BAE36318.1.
BC048437 mRNA. Translation: AAH48437.1.
CCDSiCCDS17237.1.
RefSeqiNP_035728.2. NM_011598.3.
UniGeneiMm.26654.

3D structure databases

ProteinModelPortaliO08716.
SMRiO08716. Positions 1-131.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000029038.

PTM databases

iPTMnetiO08716.
PhosphoSiteiO08716.

2D gel databases

REPRODUCTION-2DPAGEIPI00396813.

Proteomic databases

PaxDbiO08716.
PeptideAtlasiO08716.
PRIDEiO08716.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000029038; ENSMUSP00000029038; ENSMUSG00000027528.
GeneIDi21884.
KEGGimmu:21884.
UCSCiuc008opj.2. mouse.

Organism-specific databases

CTDi646480.
MGIiMGI:1194881. Fabp9.

Phylogenomic databases

eggNOGiKOG4015. Eukaryota.
ENOG4111US8. LUCA.
GeneTreeiENSGT00760000118898.
HOGENOMiHOG000004829.
HOVERGENiHBG005633.
InParanoidiO08716.
OrthoDBiEOG7NW6BZ.
PhylomeDBiO08716.
TreeFamiTF316894.

Enzyme and pathway databases

ReactomeiR-MMU-163560. Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis.

Miscellaneous databases

ChiTaRSiFabp9. mouse.
PROiO08716.
SOURCEiSearch...

Gene expression databases

BgeeiO08716.
CleanExiMM_FABP9.
ExpressionAtlasiO08716. baseline and differential.
GenevisibleiO08716. MM.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000463. Fatty_acid-bd.
IPR031259. iLBP.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
[Graphical view]
PANTHERiPTHR11955. PTHR11955. 1 hit.
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR00178. FATTYACIDBP.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00214. FABP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the protein composition of the mouse sperm perinuclear theca and characterization of its major protein constituent."
    Korley R., Pouresmaeili F., Oko R.
    Biol. Reprod. 57:1426-1432(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: CD-1.
    Tissue: Testis.
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Testis.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.
  4. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Testis.

Entry informationi

Entry nameiFABP9_MOUSE
AccessioniPrimary (citable) accession number: O08716
Secondary accession number(s): Q9DAL2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 5, 2008
Last modified: July 6, 2016
This is version 114 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.