Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Probable transcriptional regulator

Gene

Rv1534

Organism
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciMTBH37RV:G185E-5722-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulatorImported
Submitted name:
TetR family transcriptional regulatorImported
Gene namesi
Ordered Locus Names:Rv1534Imported
ORF Names:LH57_08405Imported
OrganismiMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)Imported
Taxonomic identifieri83332 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
Proteomesi
  • UP000001584 Componenti: Chromosome
  • UP000031768 Componenti: Chromosome

Organism-specific databases

TubercuListiRv1534.

Interactioni

Protein-protein interaction databases

STRINGi83332.Rv1534.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 78HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG41067SE. Bacteria.
ENOG410XUF9. LUCA.
OMAiYKSTMEE.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O08377-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRASARRRR AVSDEDKSQR RDEILAAAKI VFAHKGFHAT TVADIAKQAG
60 70 80 90 100
LAYGLIYWYF DSKDDLFHAL MAGEEEALRA HVAAELARVG GSTEAPLRAL
110 120 130 140 150
LQAAVQATFE FFETDKATVK LLFRDAYALG GRFEEHLGGI YERFIDDIEA
160 170 180 190 200
VVVAAQRRGE VVEAPSRMAA YTLAALVGQL AHRRLNTDDN VTAAQVADFV
210 220
VSLVLDGLRP RALAVGARGG RAART
Length:225
Mass (Da):24,501
Last modified:July 1, 1997 - v1
Checksum:i9D73F0F47ED67DDD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR14288.1.
AL123456 Genomic DNA. Translation: CCP44298.1.
RefSeqiNP_216050.1. NC_000962.3.
WP_003407700.1. NZ_KK339370.1.

Genome annotation databases

EnsemblBacteriaiAIR14288; AIR14288; LH57_08405.
CCP44298; CCP44298; Rv1534.
GeneIDi886420.
KEGGimtu:Rv1534.
mtv:RVBD_1534.
PATRICi18125255. VBIMycTub22151_1742.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR14288.1.
AL123456 Genomic DNA. Translation: CCP44298.1.
RefSeqiNP_216050.1. NC_000962.3.
WP_003407700.1. NZ_KK339370.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi83332.Rv1534.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIR14288; AIR14288; LH57_08405.
CCP44298; CCP44298; Rv1534.
GeneIDi886420.
KEGGimtu:Rv1534.
mtv:RVBD_1534.
PATRICi18125255. VBIMycTub22151_1742.

Organism-specific databases

TubercuListiRv1534.

Phylogenomic databases

eggNOGiENOG41067SE. Bacteria.
ENOG410XUF9. LUCA.
OMAiYKSTMEE.

Enzyme and pathway databases

BioCyciMTBH37RV:G185E-5722-MONOMER.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO08377_MYCTU
AccessioniPrimary (citable) accession number: O08377
Secondary accession number(s): F2GEG8, I6X1J2, Q7D8B3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: November 30, 2016
This is version 129 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.