UniProtKB - O08372 (O08372_ENTCL)
(max 400 entries)x
Your basket is currently empty. i
Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)
Protein
RNA polymerase sigma factor RpoS
Gene
rpoS
Organism
Enterobacter cloacae
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 304 – 323 | H-T-H motifUniRule annotationAdd BLAST | 20 |
GO - Molecular functioni
- bacterial sigma factor activity Source: UniProtKB-UniRule
- DNA binding Source: UniProtKB-UniRule
- DNA binding transcription factor activity Source: InterPro
GO - Biological processi
- response to stress Source: UniProtKB-UniRule
- transcription initiation from bacterial-type RNA polymerase promoter Source: UniProtKB-UniRule
Keywordsi
Molecular function | DNA-bindingUniRule annotationSAAS annotation, Sigma factorUniRule annotationSAAS annotation |
Biological process | Transcription, Transcription regulation |
Names & Taxonomyi
Protein namesi | Recommended name: RNA polymerase sigma factor RpoSUniRule annotationAlternative name(s): Sigma SUniRule annotation Sigma-38UniRule annotation |
Gene namesi | Name:rpoSUniRule annotationImported |
Organismi | Enterobacter cloacaeImported |
Taxonomic identifieri | 550 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Enterobacter › Enterobacter cloacae complex |
Subcellular locationi
- Cytoplasm UniRule annotation
GO - Cellular componenti
- cytoplasm Source: UniProtKB-SubCell
Keywords - Cellular componenti
CytoplasmUniRule annotationInteractioni
Subunit structurei
Interacts with the RNA polymerase core enzyme.UniRule annotation
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 134 – 147 | RNA_pol_sigma70InterPro annotationAdd BLAST | 14 | |
Domaini | 303 – 329 | RNA_pol_sigma70InterPro annotationAdd BLAST | 27 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 72 – 105 | Sigma-70 factor domain-1UniRule annotationAdd BLAST | 34 | |
Regioni | 110 – 180 | Sigma-70 factor domain-2UniRule annotationAdd BLAST | 71 | |
Regioni | 190 – 265 | Sigma-70 factor domain-3UniRule annotationAdd BLAST | 76 | |
Regioni | 278 – 331 | Sigma-70 factor domain-4UniRule annotationAdd BLAST | 54 |
Motif
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Motifi | 134 – 137 | Interaction with polymerase core subunit RpoCUniRule annotation | 4 |
Phylogenomic databases
eggNOGi | ENOG4105DG1. Bacteria. COG0568. LUCA. |
Family and domain databases
Gene3Di | 1.10.10.10. 2 hits. |
HAMAPi | MF_00959. Sigma70_RpoS. 1 hit. |
InterProi | View protein in InterPro IPR014284. RNA_pol_sigma-70_dom. IPR000943. RNA_pol_sigma70. IPR009042. RNA_pol_sigma70_r1_2. IPR007627. RNA_pol_sigma70_r2. IPR007624. RNA_pol_sigma70_r3. IPR007630. RNA_pol_sigma70_r4. IPR013325. RNA_pol_sigma_r2. IPR013324. RNA_pol_sigma_r3_r4. IPR012761. RNA_pol_sigma_RpoS. IPR036388. WH-like_DNA-bd_sf. |
Pfami | View protein in Pfam PF00140. Sigma70_r1_2. 1 hit. PF04542. Sigma70_r2. 1 hit. PF04539. Sigma70_r3. 1 hit. PF04545. Sigma70_r4. 1 hit. |
PRINTSi | PR00046. SIGMA70FCT. |
SUPFAMi | SSF88659. SSF88659. 2 hits. SSF88946. SSF88946. 1 hit. |
TIGRFAMsi | TIGR02394. rpoS_proteo. 1 hit. TIGR02937. sigma70-ECF. 1 hit. |
PROSITEi | View protein in PROSITE PS00715. SIGMA70_1. 1 hit. PS00716. SIGMA70_2. 1 hit. |
i Sequence
Sequence statusi: Complete.
O08372-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MPARVSRPGI TGRSHLMSQN TLKVHDLNED AEFDENGAEA FDEKALVEEE
60 70 80 90 100
PSDNDLAEEE LLSQGATQRV LDATQLYLGE IGYSPLLTAE EEVYFARRAL
110 120 130 140 150
RGDVASRRRM IESNLRLVVK IARRYGNRGL ALLDLIEEGN LGLIRAVEKF
160 170 180 190 200
DPERGFRFST YATWWIRQTI ERAIMNQTRT IRLPIHIVKE LNVYLRTARE
210 220 230 240 250
LSHKLDHEPS AEEIAEQLDK PVDDVSRMLR LNERITSVDT PLGGDSEKAL
260 270 280 290 300
LDILADEKDN GPEDTTQDDD MKQSIVKWLF ELNAKQREVL ARRFGLLGYE
310 320 330 340
AATLEDVGRE IGLTRERVRQ IQVEGLRRLR EILQGQGLNI EALFRE
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | Y13230 Genomic DNA. Translation: CAA73683.1. |
Similar proteinsi
Entry informationi
Entry namei | O08372_ENTCL | |
Accessioni | O08372Primary (citable) accession number: O08372 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 1, 1997 |
Last sequence update: | August 1, 1998 | |
Last modified: | March 28, 2018 | |
This is version 87 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |