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Protein
Submitted name:

Putative uncharacterized protein ORF3

Gene

ORF3

Organism
Nocardioides simplex (Arthrobacter simplex)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein ORF3Imported
Gene namesi
Name:ORF3Imported
OrganismiNocardioides simplex (Arthrobacter simplex)Imported
Taxonomic identifieri2045 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPropionibacterialesNocardioidaceaePimelobacter

Structurei

3D structure databases

ProteinModelPortaliO08306.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini15 – 7561HTH tetR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O08306-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDDAVMSST AERIRPGRSG ILAAATRLFA THGVSGTSLQ QIADAAGITK
60 70 80 90 100
AAVYHHFPTK EEVVVVAVLA PALEGEPGHR PHRRRPRGPS GQRPRPPSPR
110 120 130 140 150
RTRPSPTARA GPCSSRTQQI EEYVRNNPDH DELFDRCAML LTGPDPTPGT
160 170 180 190 200
GLQVSLFLSG LLGPAQDPSC ADIDDDALRG HRPGRTPAPA GRRRRLTWRG
210
VEPAARRAGS RP
Length:212
Mass (Da):22,741
Last modified:July 1, 1997 - v1
Checksum:iF9118E18DDF4E0B2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z93338 Genomic DNA. Translation: CAB07542.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z93338 Genomic DNA. Translation: CAB07542.1.

3D structure databases

ProteinModelPortaliO08306.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO08306_NOCSI
AccessioniPrimary (citable) accession number: O08306
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: February 17, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.