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O07621 (HEMAT_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 92. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Heme-based aerotactic transducer HemAT
Gene names
Name:hemAT
Synonyms:yhfV
Ordered Locus Names:BSU10380
OrganismBacillus subtilis (strain 168) [Reference proteome] [HAMAP]
Taxonomic identifier224308 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Heme-containing signal transducer responsible for aerotaxis, the migratory response toward or away from oxygen. Ref.3

Subunit structure

Homotetramer Probable. Ref.4

Sequence similarities

Contains 1 methyl-accepting transducer domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 432432Heme-based aerotactic transducer HemAT
PRO_0000110567

Regions

Domain184 – 420237Methyl-accepting transducer

Secondary structure

.................. 432
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
O07621 [UniParc].

Last modified July 1, 1997. Version 1.
Checksum: 87D0655974070B64

FASTA43248,767
        10         20         30         40         50         60 
MLFKKDRKQE TAYFSDSNGQ QKNRIQLTNK HADVKKQLKM VRLGDAELYV LEQLQPLIQE 

        70         80         90        100        110        120 
NIVNIVDAFY KNLDHESSLM DIINDHSSVD RLKQTLKRHI QEMFAGVIDD EFIEKRNRIA 

       130        140        150        160        170        180 
SIHLRIGLLP KWYMGAFQEL LLSMIDIYEA SITNQQELLK AIKATTKILN LEQQLVLEAF 

       190        200        210        220        230        240 
QSEYNQTRDE QEEKKNLLHQ KIQETSGSIA NLFSETSRSV QELVDKSEGI SQASKAGTVT 

       250        260        270        280        290        300 
SSTVEEKSIG GKKELEVQQK QMNKIDTSLV QIEKEMVKLD EIAQQIEKIF GIVTGIAEQT 

       310        320        330        340        350        360 
NLLSLNASIE SARAGEHGKG FAVVANEVRK LSEDTKKTVS TVSELVNNTN TQINIVSKHI 

       370        380        390        400        410        420 
KDVNELVSES KEKMTQINRL FDEIVHSMKI SKEQSGKIDV DLQAFLGGLQ EVSRAVSHVA 

       430 
ASVDSLVILT EE 

« Hide

References

« Hide 'large scale' references
[1]"The 172 kb prkA-addAB region from 83 degrees to 97 degrees of the Bacillus subtilis chromosome contains several dysfunctional genes, the glyB marker, many genes encoding transporter proteins, and the ubiquitous hit gene."
Noback M.A., Holsappel S., Kiewiet R., Terpstra P., Wambutt R., Wedler H., Venema G., Bron S.
Microbiology 144:859-875(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168.
[2]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.
[3]"Myoglobin-like aerotaxis transducers in Archaea and Bacteria."
Hou S., Larsen R.W., Boudko D., Riley C.W., Karatan E., Zimmer M., Ordal G.W., Alam M.
Nature 403:540-544(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: FUNCTION.
[4]"Resonance Raman and ligand binding studies of the oxygen-sensing signal transducer protein HemAT from Bacillus subtilis."
Aono S., Kato T., Matsuki M., Nakajima H., Ohta T., Uchida T., Kitagawa T.
J. Biol. Chem. 277:13528-13538(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: RESONANCE RAMAN SPECTROSCOPY, SUBUNIT.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Y14084 Genomic DNA. Translation: CAA74545.1.
AL009126 Genomic DNA. Translation: CAB12878.1.
PIRC69832.
RefSeqNP_388919.1. NC_000964.3.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1OR4X-ray2.15A/B1-178[»]
1OR6X-ray2.71A/B1-178[»]
ProteinModelPortalO07621.
SMRO07621. Positions 10-178, 209-412.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActO07621. 3 interactions.
STRING224308.BSU10380.

Proteomic databases

PaxDbO07621.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB12878; CAB12878; BSU10380.
GeneID936320.
KEGGbsu:BSU10380.
PATRIC18973778. VBIBacSub10457_1083.

Organism-specific databases

GenoListBSU10380. [Micado]

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000099831.
KOK06595.
OMANTMSHIA.
OrthoDBEOG6QG8FJ.
ProtClustDBCLSK2393374.

Enzyme and pathway databases

BioCycBSUB:BSU10380-MONOMER.

Family and domain databases

Gene3D1.10.490.10. 1 hit.
InterProIPR009050. Globin-like.
IPR012292. Globin_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF46458. SSF46458. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceO07621.

Entry information

Entry nameHEMAT_BACSU
AccessionPrimary (citable) accession number: O07621
Entry history
Integrated into UniProtKB/Swiss-Prot: June 6, 2002
Last sequence update: July 1, 1997
Last modified: April 16, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList