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Protein

HTH-type transcriptional regulator CueR

Gene

cueR

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Transcriptional activator of the copZA operon.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi14 – 33H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciBSUB:BSU09560-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator CueR
Gene namesi
Name:cueR
Synonyms:yhdQ
Ordered Locus Names:BSU09560
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000981101 – 143HTH-type transcriptional regulator CueRAdd BLAST143

Proteomic databases

PaxDbiO07586.
PRIDEiO07586.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100005346.

Structurei

3D structure databases

ProteinModelPortaliO07586.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 79HTH merR-typePROSITE-ProRule annotationAdd BLAST69

Sequence similaritiesi

Contains 1 HTH merR-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

HOGENOMiHOG000266083.
InParanoidiO07586.
OMAiDCKQQRL.
PhylomeDBiO07586.

Family and domain databases

InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
[Graphical view]
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
PRINTSiPR00040. HTHMERR.
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
PROSITEiPS50937. HTH_MERR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O07586-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVGRDIDGAE TYRISELAAL AGVTKRTVDY YTNLGLLTPA RSCSNYRYYD
60 70 80 90 100
ENALKRLIFI VDCKKQRLAL SDIKDRLENQ FPSSAKLDDE IGNLALEIDH
110 120 130 140
MNQNISGILH RFERLKPEDR DKLKSKLPPE KLAVFQSFML LLS
Length:143
Mass (Da):16,395
Last modified:July 1, 1997 - v1
Checksum:iC272E336AB68452D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y14082 Genomic DNA. Translation: CAA74501.1.
AL009126 Genomic DNA. Translation: CAB12795.1.
PIRiG69826.
RefSeqiNP_388837.1. NC_000964.3.
WP_010886460.1. NZ_JNCM01000035.1.

Genome annotation databases

EnsemblBacteriaiCAB12795; CAB12795; BSU09560.
GeneIDi939283.
KEGGibsu:BSU09560.
PATRICi18973608. VBIBacSub10457_0998.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y14082 Genomic DNA. Translation: CAA74501.1.
AL009126 Genomic DNA. Translation: CAB12795.1.
PIRiG69826.
RefSeqiNP_388837.1. NC_000964.3.
WP_010886460.1. NZ_JNCM01000035.1.

3D structure databases

ProteinModelPortaliO07586.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100005346.

Proteomic databases

PaxDbiO07586.
PRIDEiO07586.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB12795; CAB12795; BSU09560.
GeneIDi939283.
KEGGibsu:BSU09560.
PATRICi18973608. VBIBacSub10457_0998.

Phylogenomic databases

HOGENOMiHOG000266083.
InParanoidiO07586.
OMAiDCKQQRL.
PhylomeDBiO07586.

Enzyme and pathway databases

BioCyciBSUB:BSU09560-MONOMER.

Family and domain databases

InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
[Graphical view]
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
PRINTSiPR00040. HTHMERR.
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
PROSITEiPS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCUER_BACSU
AccessioniPrimary (citable) accession number: O07586
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: July 1, 1997
Last modified: October 5, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Miscellaneous

Binds a DNA inverted repeat of copZA operon.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.