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Protein

Uncharacterized transcriptional regulatory protein YhcZ

Gene

yhcZ

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Member of the two-component regulatory system YhcY/YhcZ.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi166 – 185H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation, Two-component regulatory system

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciBSUB:BSU09330-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transcriptional regulatory protein YhcZ
Gene namesi
Name:yhcZ
Ordered Locus Names:BSU09330
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003607761 – 214Uncharacterized transcriptional regulatory protein YhcZAdd BLAST214

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei534-aspartylphosphatePROSITE-ProRule annotation1

Post-translational modificationi

Phosphorylated by YhcY.By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiO07528.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100005153.

Structurei

3D structure databases

ProteinModelPortaliO07528.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 118Response regulatoryPROSITE-ProRule annotationAdd BLAST117
Domaini142 – 207HTH luxR-typePROSITE-ProRule annotationAdd BLAST66

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.PROSITE-ProRule annotation
Contains 1 response regulatory domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105WH1. Bacteria.
COG2197. LUCA.
HOGENOMiHOG000034813.
InParanoidiO07528.
KOiK02479.
OMAiKGLRFFF.
PhylomeDBiO07528.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O07528-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIVIADDHH VVRKGLRFFF ATQDDIEVVG EAATGLEALR VIEETKPDLV
60 70 80 90 100
LMDLSMPEMD GIQAIKKAIQ QFPDTNIIVL TSYSDQEHVI PALQAGAKAY
110 120 130 140 150
QLKDTEPEEL VKTRQVHGGE YKLSTAIMPH VLTHMKNQHD PEKEKYYQLT
160 170 180 190 200
RREKDVLTEI ANGKSNKEIA AALFISEKTV KTHVSNLLAK LEVADRTQAA
210
LFAVKYNLNG EISK
Length:214
Mass (Da):24,023
Last modified:July 1, 1997 - v1
Checksum:i88B77975D0C258F4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y14079 Genomic DNA. Translation: CAA74433.1.
AL009126 Genomic DNA. Translation: CAB12761.1.
PIRiF69824.
RefSeqiNP_388814.1. NC_000964.3.
WP_003245647.1. NZ_JNCM01000035.1.

Genome annotation databases

EnsemblBacteriaiCAB12761; CAB12761; BSU09330.
GeneIDi939750.
KEGGibsu:BSU09330.
PATRICi18973562. VBIBacSub10457_0975.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y14079 Genomic DNA. Translation: CAA74433.1.
AL009126 Genomic DNA. Translation: CAB12761.1.
PIRiF69824.
RefSeqiNP_388814.1. NC_000964.3.
WP_003245647.1. NZ_JNCM01000035.1.

3D structure databases

ProteinModelPortaliO07528.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100005153.

Proteomic databases

PaxDbiO07528.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB12761; CAB12761; BSU09330.
GeneIDi939750.
KEGGibsu:BSU09330.
PATRICi18973562. VBIBacSub10457_0975.

Phylogenomic databases

eggNOGiENOG4105WH1. Bacteria.
COG2197. LUCA.
HOGENOMiHOG000034813.
InParanoidiO07528.
KOiK02479.
OMAiKGLRFFF.
PhylomeDBiO07528.

Enzyme and pathway databases

BioCyciBSUB:BSU09330-MONOMER.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYHCZ_BACSU
AccessioniPrimary (citable) accession number: O07528
Secondary accession number(s): Q796Y1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: July 1, 1997
Last modified: October 5, 2016
This is version 122 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.