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Protein

HTH-type transcriptional regulator BbuR

Gene

bbuR

Organism
Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi32 – 51H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator BbuR
Gene namesi
Name:bbuR
Ordered Locus Names:BB4328
OrganismiBordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus)
Taxonomic identifieri257310 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
Proteomesi
  • UP000001027 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001055931 – 325HTH-type transcriptional regulator BbuRAdd BLAST325

Interactioni

Protein-protein interaction databases

STRINGi257310.BB4328.

Structurei

3D structure databases

ProteinModelPortaliO06703.
SMRiO06703.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 72HTH lysR-typePROSITE-ProRule annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4105EF7. Bacteria.
COG0583. LUCA.
OMAiGMAIMPA.
OrthoDBiPOG091H031C.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS50931. HTH_LYSR. 1 hit.

Sequencei

Sequence statusi: Complete.

O06703-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAEDFALPA DHNPLDTDLL NVFCWVAKTQ SFSRAAAELG TSQPVITRKI
60 70 80 90 100
GRLEECLGVA LFVRSNRGCV LTAAGTVLIG KAPSILLQLA EIKEEVSHSA
110 120 130 140 150
SVVSGSLSMG ITHAASTVMA PRLLPVIARR WPKLQVDVME ALSRTLVERV
160 170 180 190 200
LHGELALAVL FDPPPHPDLI CRPLLIERLC LVGNPQSDLR TMAPPTIRDL
210 220 230 240 250
ARLPLMLPSG GQIIRNLLED AFAEINEPLK PVYEAASMAM LREMAVQGIG
260 270 280 290 300
YTLLTQGGVA EDVAAGKLIA QALPDKGMVV TLTLITKRES TRLRNVRLLS
310 320
DFVASEIRAV ARQGQWPGHP TVVGG
Length:325
Mass (Da):34,987
Last modified:September 19, 2003 - v2
Checksum:i8720CA118CF86EC3
GO

Sequence cautioni

The sequence AAC46123 differs from that shown. Reason: Frameshift at position 287.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF000579 Genomic DNA. Translation: AAC46123.1. Frameshift.
BX640450 Genomic DNA. Translation: CAE34691.1.
RefSeqiWP_003814834.1. NC_002927.3.

Genome annotation databases

EnsemblBacteriaiCAE34691; CAE34691; BB4328.
KEGGibbr:BB4328.

Similar proteinsi

Entry informationi

Entry nameiBBUR_BORBR
AccessioniPrimary (citable) accession number: O06703
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: September 19, 2003
Last modified: January 31, 2018
This is version 98 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome