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Protein
Submitted name:

Cytolethal distending toxin protein B

Gene

cdtB

Organism
Haemophilus ducreyi
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Cytolethal distending toxin protein BImported
Gene namesi
Name:cdtBImported
OrganismiHaemophilus ducreyiImported
Taxonomic identifieri730 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_500996908923 – 283Sequence analysisAdd BLAST261

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1SR4X-ray2.00B23-283[»]
ProteinModelPortaliO06523.
SMRiO06523.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO06523.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 274Endo/exonuclease/phosphataseInterPro annotationAdd BLAST245

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108TMH. Bacteria.
ENOG4111HHH. LUCA.

Family and domain databases

CDDicd09081. CdtB. 1 hit.
Gene3Di3.60.10.10. 1 hit.
InterProiView protein in InterPro
IPR003539. CD_toxinB.
IPR005135. Endo/exonuclease/phosphatase.
PfamiView protein in Pfam
PF03372. Exo_endo_phos. 1 hit.
PIRSFiPIRSF018539. CDT_B. 1 hit.
PRINTSiPR01388. CDTOXINB.
SUPFAMiSSF56219. SSF56219. 1 hit.

Sequencei

Sequence statusi: Complete.

O06523-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQWVKQLSVV FCVMLFSFSS YANLSDFKVA TWNLQGSSAV NESKWNINVR
60 70 80 90 100
QLLSGEQGAD ILMVQEAGSL PSSAVRTSRV IQHGGTPIEE YTWNLGTRSR
110 120 130 140 150
PNMVYIYYSR LDVGANRVNL AIVSRRQADE AFIVHSDSSV LQSRPAVGIR
160 170 180 190 200
IGTDVFFTVH ALATGGSDAV SLIRNIFTTF NSSSSPPERR VYSWMVVGDF
210 220 230 240 250
NRAPANLEVA LRQEPAVSEN TIIIAPTEPT HRSGNILDYA ILHDAHLPRR
260 270 280
EQARERIGAS LMLNQLRSQI TSDHFPVSFV RDR
Length:283
Mass (Da):31,540
Last modified:July 1, 1997 - v1
Checksum:i4C8FB205ACB6A1BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U53215 Genomic DNA. Translation: AAB57726.1.
RefSeqiWP_010944837.1. NZ_LMZZ01000025.1.

Genome annotation databases

GeneIDi24944656.
PATRICifig|730.10.peg.745.

Similar proteinsi

Entry informationi

Entry nameiO06523_HAEDC
AccessioniPrimary (citable) accession number: O06523
Secondary accession number(s): Q7BY49
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: August 30, 2017
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources