SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

O06477

- YFMS_BACSU

UniProt

O06477 - YFMS_BACSU

Protein

Putative sensory transducer protein YfmS

Gene

yfmS

Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 72 (01 Oct 2014)
      Sequence version 1 (01 Jul 1997)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. Attractants increase the level of methylation while repellents decrease the level of methylation By similarity.By similarity

    GO - Molecular functioni

    1. signal transducer activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Transducer

    Enzyme and pathway databases

    BioCyciBSUB:BSU07360-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative sensory transducer protein YfmS
    Alternative name(s):
    Methyl-accepting chemotaxis protein
    Gene namesi
    Name:yfmS
    Ordered Locus Names:BSU07360
    OrganismiBacillus subtilis (strain 168)
    Taxonomic identifieri224308 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

    Organism-specific databases

    GenoListiBSU07360.

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 286286Putative sensory transducer protein YfmSPRO_0000388354Add
    BLAST

    Proteomic databases

    PaxDbiO06477.

    Expressioni

    Inductioni

    Transcriptionally regulated by SigD; part of the yfmT/yfmS operon.1 Publication

    Interactioni

    Protein-protein interaction databases

    STRINGi224308.BSU07360.

    Structurei

    3D structure databases

    ProteinModelPortaliO06477.
    SMRiO06477. Positions 118-273.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini68 – 286219Methyl-accepting transducerPROSITE-ProRule annotationsAdd
    BLAST

    Sequence similaritiesi

    Contains 1 methyl-accepting transducer domain.PROSITE-ProRule annotations

    Phylogenomic databases

    eggNOGiCOG0840.
    HOGENOMiHOG000057905.
    OMAiMQEISGS.
    OrthoDBiEOG61P6P3.
    PhylomeDBiO06477.

    Family and domain databases

    InterProiIPR004089. MCPsignal_dom.
    IPR029151. Sensor-like.
    [Graphical view]
    PfamiPF00015. MCPsignal. 1 hit.
    [Graphical view]
    SMARTiSM00283. MA. 1 hit.
    [Graphical view]
    SUPFAMiSSF103190. SSF103190. 1 hit.
    PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
    [Graphical view]
    ProtoNetiSearch...

    Sequencei

    Sequence statusi: Complete.

    O06477-1 [UniParc]FASTAAdd to Basket

    « Hide

    MELTINTEKE TADILDAFIK VAPYLNSLVQ DDITIGIYDT EKLLVNIPAK    50
    TFSLNVKAGD PLQEGDIITD AIRSNQKKTS MVPKELFGFP LIARAIPLHD 100
    ENGRVIGGVG LGTSLEESSK LHDVAESLSA VVEQTAAAIS DISESINGFS 150
    TQMSGISSQA KKVSESAGEI ADISVTVKGI SDQSNLLGLN AAIEAARAGE 200
    SGKGFSVVAD EIRKLATHSK ENVGQIDQIT KKIHSLLKGL EESIESINQH 250
    TDGQAAAVEQ ISATMQEISG SAQHLAKMAE KALEEE 286
    Length:286
    Mass (Da):30,324
    Last modified:July 1, 1997 - v1
    Checksum:i29DE50D528312005
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D86418 Genomic DNA. Translation: BAA20108.1.
    AL009126 Genomic DNA. Translation: CAB12555.1.
    PIRiB69814.
    RefSeqiNP_388617.1. NC_000964.3.

    Genome annotation databases

    EnsemblBacteriaiCAB12555; CAB12555; BSU07360.
    GeneIDi936102.
    KEGGibsu:BSU07360.
    PATRICi18973122. VBIBacSub10457_0775.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D86418 Genomic DNA. Translation: BAA20108.1 .
    AL009126 Genomic DNA. Translation: CAB12555.1 .
    PIRi B69814.
    RefSeqi NP_388617.1. NC_000964.3.

    3D structure databases

    ProteinModelPortali O06477.
    SMRi O06477. Positions 118-273.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224308.BSU07360.

    Proteomic databases

    PaxDbi O06477.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB12555 ; CAB12555 ; BSU07360 .
    GeneIDi 936102.
    KEGGi bsu:BSU07360.
    PATRICi 18973122. VBIBacSub10457_0775.

    Organism-specific databases

    GenoListi BSU07360.

    Phylogenomic databases

    eggNOGi COG0840.
    HOGENOMi HOG000057905.
    OMAi MQEISGS.
    OrthoDBi EOG61P6P3.
    PhylomeDBi O06477.

    Enzyme and pathway databases

    BioCyci BSUB:BSU07360-MONOMER.

    Family and domain databases

    InterProi IPR004089. MCPsignal_dom.
    IPR029151. Sensor-like.
    [Graphical view ]
    Pfami PF00015. MCPsignal. 1 hit.
    [Graphical view ]
    SMARTi SM00283. MA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF103190. SSF103190. 1 hit.
    PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A 23.4 kb segment at the 69 degrees-70 degrees region of the Bacillus subtilis genome."
      Yamamoto H., Uchiyama S., Nugroho F.A., Sekiguchi J.
      Microbiology 143:1317-1320(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: 168 / AC327.
    2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
      Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
      , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
      Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 168.
    3. "Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses."
      Serizawa M., Yamamoto H., Yamaguchi H., Fujita Y., Kobayashi K., Ogasawara N., Sekiguchi J.
      Gene 329:125-136(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: INDUCTION, OPERON STRUCTURE.
      Strain: 168.

    Entry informationi

    Entry nameiYFMS_BACSU
    AccessioniPrimary (citable) accession number: O06477
    Secondary accession number(s): Q797A5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 3, 2009
    Last sequence update: July 1, 1997
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Bacillus subtilis
      Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3

    Similar proteinsi