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Protein
Submitted name:

Oxidative stress transcriptional regulator

Gene

oxyR

Organism
Xanthomonas campestris
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Oxidative stress transcriptional regulatorImported
Gene namesi
Name:oxyRImported
OrganismiXanthomonas campestrisImported
Taxonomic identifieri339 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

Interactioni

Protein-protein interaction databases

STRINGi190485.XCC0832.

Structurei

3D structure databases

ProteinModelPortaliO06466.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 58HTH lysR-type DNA-bindingInterPro annotationAdd BLAST58

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C5Q. Bacteria.
ENOG410XNR2. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O06466-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLRDLKYLV ALADHKHFGR AASACFVSQP TLSTQIKKLE DELGVSLVER
60 70 80 90 100
APRKVMLTPA GREAAVRARS IVAEVEQMKE AARRSQDPEA GTVRLGIFPT
110 120 130 140 150
LAPYLLPHVV PRIRQRFPRL ELLLIEEKSD QLMHQLREGR LDAALLALPL
160 170 180 190 200
QDDQLHAEFL FEEPFVLAVP EGHPLSRHDS MTLDDLSEQR LLLLEDGHCL
210 220 230 240 250
RDQALDVCHL AGALEKSEFQ ATSLETLRQM VAANVGVTLL PLLAVKPPVA
260 270 280 290 300
RSENIRLIRF REDKQPSRRI AMAWRRSSAM TAFLEQLSQL FKELPESLFT
310
LDQPATGPKA VAA
Length:313
Mass (Da):35,089
Last modified:July 1, 1997 - v1
Checksum:iA807B37115916EFC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U94336 Genomic DNA. Translation: AAC45427.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U94336 Genomic DNA. Translation: AAC45427.1.

3D structure databases

ProteinModelPortaliO06466.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190485.XCC0832.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4105C5Q. Bacteria.
ENOG410XNR2. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO06466_XANCA
AccessioniPrimary (citable) accession number: O06466
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: November 30, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.