O05937 (O05937_PSESP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alginate lyase EMBL BAA19848.1

Gene names

Name:

alyll EMBL BAA19848.1

Organism

Pseudomonas sp. EMBL BAA19848.1

Taxonomic identifier

306 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria

Protein attributes

Sequence length	713 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL BAA19848.1
Gene Ontology (GO)
Biological process	alginic acid catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	periplasmic space Inferred from electronic annotation. Source: InterPro
Molecular function	poly(beta-D-mannuronate) lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O05937 [UniParc]. Last modified July 1, 1997. Version 1. Checksum: 2CE6CD2895899F2E	FASTA	713	79,805
	10 20 30 40 50 60 MNYLKKVVLV SFCAFFSLSL MAQTHPSIML TKANVAAVKK GVNTYPLLRQ SYQAVKNAAD 70 80 90 100 110 120 KALAQPIVVP VPKDGGGGYT HEQHKKNYSN MLNCGVAYQI SGEKKYADYV KNVMLNYASQ 130 140 150 160 170 180 YGKWPLHPKR KSEEDGGRIF WQSLNDFVWQ LYTIQAYDLV YDGIPATDRK TIEEKLFVPI 190 200 210 220 230 240 LKFFTEDRYD VFNKIHNHGT WNLAAVGITG YVLNKREYVE MAIKGSKKDG KTGYLAQIDQ 250 260 270 280 290 300 LFSPDGYYME GPYYQRYALL PFVLFAKAIN NYEPSRKIFE YRDKLLSKAI HTSLQTSYTD 310 320 330 340 350 360 KTFFPLNDAI KDKTYESVEL VYGVDLAYAD IKAEVDLLDI ARQQNRVIVS DAGLKVAADL 370 380 390 400 410 420 AAGKAVPFKY QTLWIRDGGK GDEGGLGILR NGPNTDQQCV VLKAASQGMG HGHFDRLNLL 430 440 450 460 470 480 FYDNTTEIFP DYGAARFLNI DTKNGGGYLP ENNTWAKQTV AHNALVVDQT SHFNAKLGPA 490 500 510 520 530 540 DKASPTLLYF SNQPNLKVVS AKEDKAYTDV TMLRTSALVK VEGLDKPLLI DVMQAQSAKS 550 560 570 580 590 600 HQYDLPFWYK GQLVNTSFPV TAKANQLTAL GDKNGYQHIW LNASNPLEGK SGMVGLLNKN 610 620 630 640 650 660 RFYTTHFVSD NPLEVKLLSI GANDPEMNLV DGKAFMLSSS GQNQTFVSIT ETHGGTDPIN 670 680 690 700 710 ETVSSALPTV SGLKLIKSDA QQTIISFKVN ERTYTYQINY TEKQQLYIIK IKE

References

[1]	"Nucleotide sequence and expression of a gene (alyII) for an alginate lyase from Pseudomonas sp. OS-ALG-9." Kraiwattanapong J., Ooi T., Kinoshita S. Submitted (APR-1997) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: OS-ALG-9 EMBL BAA19848.1.
[2]	"Cloning and sequence analysis of the gene (alyII) coding for an alginate lyase of Pseudomonas sp. OS-ALG-9." Kraiwattanapong J., Ooi T., Kinoshita S. Biosci. Biotechnol. Biochem. 61:1853-1857(1997) [PubMed: 9404064] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB003330 Genomic DNA. Translation: BAA19848.1.
PIR	JC5870.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	PL17. Polysaccharide Lyase Family 17.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR008397. Alginate_lyase_dom. IPR008929. Chondroitin_lyas. IPR012480. Hepar_II_III. [Graphical view]
Gene3D	G3DSA:1.50.10.110. Alginate_lyase. 1 hit.
Pfam	PF05426. Alginate_lyase. 1 hit. PF07940. Hepar_II_III. 1 hit. [Graphical view]
SUPFAM	SSF48230. Chondroitin_lyas. 1 hit.
ProtoNet	Search...

Entry information

Entry name

O05937_PSESP

Accession

Primary (citable) accession number: O05937

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 1997
Last sequence update:	July 1, 1997
Last modified:	September 21, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)