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Protein

Rubredoxin

Gene

rubA

Organism
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Electron transportUniRule annotationSAAS annotation, Transport

Keywords - Ligandi

IronUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciMTBRV:RV3251C-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
RubredoxinUniRule annotation
Gene namesi
Name:rubAImported
Ordered Locus Names:Rv3251cImported
ORF Names:LH57_17775Imported
OrganismiMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)Imported
Taxonomic identifieri83332 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
Proteomesi
  • UP000001584 Componenti: Chromosome
  • UP000031768 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi83332.Rv3251c.

Structurei

3D structure databases

SMRiO05894. Positions 1-55.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 5353Rubredoxin-likeInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the rubredoxin family.UniRule annotation
Contains 1 rubredoxin-like domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG1773. LUCA.
HOGENOMiHOG000223371.
OMAiYACKVCT.
OrthoDBiEOG69SKK0.
PhylomeDBiO05894.

Family and domain databases

Gene3Di2.20.28.10. 1 hit.
InterProiIPR024934. Rubredoxin-like_dom.
IPR004039. Rubredoxin-type_fold.
IPR024935. Rubredoxin_dom.
IPR018527. Rubredoxin_Fe_BS.
[Graphical view]
PfamiPF00301. Rubredoxin. 1 hit.
[Graphical view]
PRINTSiPR00163. RUBREDOXIN.
PROSITEiPS00202. RUBREDOXIN. 1 hit.
PS50903. RUBREDOXIN_LIKE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O05894-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAYRCPVCD YVYDEANGDA REGFPAGTGW DQIPDDWCCP DCAVREKVDF

EKIGG
Length:55
Mass (Da):6,107
Last modified:July 5, 2004 - v3
Checksum:i4BE92E74AAB55FE0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR16044.1.
AL123456 Genomic DNA. Translation: CCP46070.1.
RefSeqiNP_217768.1. NC_000962.3.
WP_003417045.1. NZ_KK339370.1.

Genome annotation databases

EnsemblBacteriaiAIR16044; AIR16044; LH57_17775.
CCP46070; CCP46070; Rv3251c.
GeneIDi888747.
KEGGimtu:Rv3251c.
mtv:RVBD_3251c.
PATRICi18155849. VBIMycTub87468_3635.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR16044.1.
AL123456 Genomic DNA. Translation: CCP46070.1.
RefSeqiNP_217768.1. NC_000962.3.
WP_003417045.1. NZ_KK339370.1.

3D structure databases

SMRiO05894. Positions 1-55.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi83332.Rv3251c.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIR16044; AIR16044; LH57_17775.
CCP46070; CCP46070; Rv3251c.
GeneIDi888747.
KEGGimtu:Rv3251c.
mtv:RVBD_3251c.
PATRICi18155849. VBIMycTub87468_3635.

Phylogenomic databases

eggNOGiCOG1773. LUCA.
HOGENOMiHOG000223371.
OMAiYACKVCT.
OrthoDBiEOG69SKK0.
PhylomeDBiO05894.

Enzyme and pathway databases

BioCyciMTBRV:RV3251C-MONOMER.

Family and domain databases

Gene3Di2.20.28.10. 1 hit.
InterProiIPR024934. Rubredoxin-like_dom.
IPR004039. Rubredoxin-type_fold.
IPR024935. Rubredoxin_dom.
IPR018527. Rubredoxin_Fe_BS.
[Graphical view]
PfamiPF00301. Rubredoxin. 1 hit.
[Graphical view]
PRINTSiPR00163. RUBREDOXIN.
PROSITEiPS00202. RUBREDOXIN. 1 hit.
PS50903. RUBREDOXIN_LIKE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25618 / H37RvImported and H37RvImported.
  2. "Phylogenetic analysis of Mycobacterial species using whole genome sequences."
    Hazbon M.H., Riojas M.A., Damon A.M., Alalade R.O., Cantwell B.J., Monaco A., King S., Sohrabi A.
    Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27294 / TMC 102 / H37RvImported and H37RvImported.

Entry informationi

Entry nameiO05894_MYCTU
AccessioniPrimary (citable) accession number: O05894
Secondary accession number(s): F2GKC7, I6X6T5, L0TES5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 5, 2004
Last modified: April 13, 2016
This is version 118 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.