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O05641

- RS5_SULAC

UniProt

O05641 - RS5_SULAC

Protein

30S ribosomal protein S5

Gene

rps5

Organism
Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 85 (01 Oct 2014)
      Sequence version 1 (01 Jul 1997)
      Previous versions | rss
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    Functioni

    With S4 and S12 plays an important role in translational accuracy.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: UniProtKB-HAMAP

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciSACI330779:GH9J-569-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S5UniRule annotation
    Gene namesi
    Name:rps5UniRule annotation
    Ordered Locus Names:Saci_0577
    OrganismiSulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
    Taxonomic identifieri330779 [NCBI]
    Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
    ProteomesiUP000001018: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 21421430S ribosomal protein S5PRO_0000131660Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Contacts protein S4.UniRule annotation

    Protein-protein interaction databases

    STRINGi330779.Saci_0577.

    Structurei

    3D structure databases

    ProteinModelPortaliO05641.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini54 – 11764S5 DRBMUniRule annotationAdd
    BLAST

    Domaini

    The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.

    Sequence similaritiesi

    Belongs to the ribosomal protein S5P family.UniRule annotation
    Contains 1 S5 DRBM domain.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0098.
    HOGENOMiHOG000072596.
    KOiK02988.
    OMAiVYTQSKG.

    Family and domain databases

    Gene3Di3.30.160.20. 1 hit.
    3.30.230.10. 1 hit.
    HAMAPiMF_01307_A. Ribosomal_S5_A.
    InterProiIPR014720. dsRNA-bd_dom.
    IPR000851. Ribosomal_S5.
    IPR005324. Ribosomal_S5_C.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
    IPR005711. Ribosomal_S5_euk/arc.
    IPR013810. Ribosomal_S5_N.
    IPR018192. Ribosomal_S5_N_CS.
    [Graphical view]
    PANTHERiPTHR13718. PTHR13718. 1 hit.
    PfamiPF00333. Ribosomal_S5. 1 hit.
    PF03719. Ribosomal_S5_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF54211. SSF54211. 1 hit.
    TIGRFAMsiTIGR01020. rpsE_arch. 1 hit.
    PROSITEiPS00585. RIBOSOMAL_S5. 1 hit.
    PS50881. S5_DSRBD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O05641-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSEEVPVIKL EDWKPRTKVG QLIKEGKINS MKELFERNLP IVEPEIVDVL    50
    LPKLRYDIVD IGIVQKQTDA GELSRYKVLI VMGNMDGYIS YGTGKAKQLR 100
    VAIQKAIRDA KMRIIPVRRG CGSWECTCGE SHSLPFIVSG KAGSVEVTLL 150
    PAPKGTGLVV GSVLKTFLSL AGLKDVWSRT KGSTYTHENF IKAAYIALYN 200
    TYRFVTPVDW GRMK 214
    Length:214
    Mass (Da):23,876
    Last modified:July 1, 1997 - v1
    Checksum:i1F86FFAA846BD7B1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y07778 Genomic DNA. Translation: CAA69097.1.
    CP000077 Genomic DNA. Translation: AAY79969.1.
    RefSeqiWP_011277471.1. NC_007181.1.
    YP_255262.1. NC_007181.1.

    Genome annotation databases

    EnsemblBacteriaiAAY79969; AAY79969; Saci_0577.
    GeneIDi3473215.
    KEGGisai:Saci_0577.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y07778 Genomic DNA. Translation: CAA69097.1 .
    CP000077 Genomic DNA. Translation: AAY79969.1 .
    RefSeqi WP_011277471.1. NC_007181.1.
    YP_255262.1. NC_007181.1.

    3D structure databases

    ProteinModelPortali O05641.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 330779.Saci_0577.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY79969 ; AAY79969 ; Saci_0577 .
    GeneIDi 3473215.
    KEGGi sai:Saci_0577.

    Phylogenomic databases

    eggNOGi COG0098.
    HOGENOMi HOG000072596.
    KOi K02988.
    OMAi VYTQSKG.

    Enzyme and pathway databases

    BioCyci SACI330779:GH9J-569-MONOMER.

    Family and domain databases

    Gene3Di 3.30.160.20. 1 hit.
    3.30.230.10. 1 hit.
    HAMAPi MF_01307_A. Ribosomal_S5_A.
    InterProi IPR014720. dsRNA-bd_dom.
    IPR000851. Ribosomal_S5.
    IPR005324. Ribosomal_S5_C.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
    IPR005711. Ribosomal_S5_euk/arc.
    IPR013810. Ribosomal_S5_N.
    IPR018192. Ribosomal_S5_N_CS.
    [Graphical view ]
    PANTHERi PTHR13718. PTHR13718. 1 hit.
    Pfami PF00333. Ribosomal_S5. 1 hit.
    PF03719. Ribosomal_S5_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54211. SSF54211. 1 hit.
    TIGRFAMsi TIGR01020. rpsE_arch. 1 hit.
    PROSITEi PS00585. RIBOSOMAL_S5. 1 hit.
    PS50881. S5_DSRBD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The structure and evolution of the ribosomal proteins encoded in the spc operon of the archaeon (Crenarchaeota) Sulfolobus acidocaldarius."
      Yang D., Kusser I., Koepke A.K., Koop B.F., Matheson A.T.
      Mol. Phylogenet. Evol. 12:177-185(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770.
    2. "The genome of Sulfolobus acidocaldarius, a model organism of the Crenarchaeota."
      Chen L., Bruegger K., Skovgaard M., Redder P., She Q., Torarinsson E., Greve B., Awayez M., Zibat A., Klenk H.-P., Garrett R.A.
      J. Bacteriol. 187:4992-4999(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770.

    Entry informationi

    Entry nameiRS5_SULAC
    AccessioniPrimary (citable) accession number: O05641
    Secondary accession number(s): Q4JB60
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2000
    Last sequence update: July 1, 1997
    Last modified: October 1, 2014
    This is version 85 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3