Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

50S ribosomal protein L18

Gene

rpl18

Organism
Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciSACI330779:GH9J-570-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L18UniRule annotation
Gene namesi
Name:rpl18UniRule annotation
Ordered Locus Names:Saci_0578
OrganismiSulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Taxonomic identifieri330779 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001018 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 19719750S ribosomal protein L18PRO_0000131417Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts the 5S and 23S rRNAs.UniRule annotation

Protein-protein interaction databases

STRINGi330779.Saci_0578.

Structurei

3D structure databases

ProteinModelPortaliO05640.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L18P family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04088. Archaea.
COG0256. LUCA.
HOGENOMiHOG000105947.
KOiK02881.
OMAiGDTNNTP.

Family and domain databases

HAMAPiMF_01337_A. Ribosomal_L18_A. 1 hit.
InterProiIPR005485. Rbsml_L5_euk/L18_arc.
IPR025607. Rbsml_L5e/L18P_C.
[Graphical view]
PANTHERiPTHR23410. PTHR23410. 1 hit.
PfamiPF14204. Ribosomal_L18_c. 1 hit.
PF17144. Ribosomal_L5e. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O05640-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQGPNYRIK FRRRREGKTD YYTRYTYVIN NAIRFVPRLT NKYVIVSVSK
60 70 80 90 100
FDQKGDIMIA YAHSIELVKK YGWKGDTNNT PAAYLTGYLA GLRAVKSGVK
110 120 130 140 150
AAVSDIGLFV PVKGGRIFAV IKGAIDAGLK VPVGDLGKLK DRVNGSHISA
160 170 180 190
YAQKLKNENQ ELYNKLFSSY IQRGLDPVLL PQHFEEVLNK IKENGGK
Length:197
Mass (Da):22,105
Last modified:July 1, 1997 - v1
Checksum:i3908018D5FBF2571
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y07778 Genomic DNA. Translation: CAA69096.1.
CP000077 Genomic DNA. Translation: AAY79970.1.
RefSeqiWP_011277472.1. NC_007181.1.

Genome annotation databases

EnsemblBacteriaiAAY79970; AAY79970; Saci_0578.
GeneIDi3473216.
KEGGisai:Saci_0578.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y07778 Genomic DNA. Translation: CAA69096.1.
CP000077 Genomic DNA. Translation: AAY79970.1.
RefSeqiWP_011277472.1. NC_007181.1.

3D structure databases

ProteinModelPortaliO05640.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi330779.Saci_0578.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAY79970; AAY79970; Saci_0578.
GeneIDi3473216.
KEGGisai:Saci_0578.

Phylogenomic databases

eggNOGiarCOG04088. Archaea.
COG0256. LUCA.
HOGENOMiHOG000105947.
KOiK02881.
OMAiGDTNNTP.

Enzyme and pathway databases

BioCyciSACI330779:GH9J-570-MONOMER.

Family and domain databases

HAMAPiMF_01337_A. Ribosomal_L18_A. 1 hit.
InterProiIPR005485. Rbsml_L5_euk/L18_arc.
IPR025607. Rbsml_L5e/L18P_C.
[Graphical view]
PANTHERiPTHR23410. PTHR23410. 1 hit.
PfamiPF14204. Ribosomal_L18_c. 1 hit.
PF17144. Ribosomal_L5e. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL18_SULAC
AccessioniPrimary (citable) accession number: O05640
Secondary accession number(s): Q4JB59
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: July 1, 1997
Last modified: September 7, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.