Skip Header

Contribute Send feedback
Read comments (?) or add your own

O05594 (O05594_MYCTU) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:rpfB EMBL CAB08136.1
Ordered Locus Names:MT1038, Rv1009
OrganismMycobacterium tuberculosis
Taxonomic identifier1773 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex

Protein attributes

Sequence length362 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
O05594 [UniParc].

Last modified July 1, 1997. Version 1.
Checksum: 02B55D8C70373D10

FASTA36238,078
        10         20         30         40         50         60 
MLRLVVGALL LVLAFAGGYA VAACKTVTLT VDGTAMRVTT MKSRVIDIVE ENGFSVDDRD 

        70         80         90        100        110        120 
DLYPAAGVQV HDADTIVLRR SRPLQISLDG HDAKQVWTTA STVDEALAQL AMTDTAPAAA 

       130        140        150        160        170        180 
SRASRVPLSG MALPVVSAKT VQLNDGGLVR TVHLPAPNVA GLLSAAGVPL LQSDHVVPAA 

       190        200        210        220        230        240 
TAPIVEGMQI QVTRNRIKKV TERLPLPPNA RRVEDPEMNM SREVVEDPGV PGTQDVTFAV 

       250        260        270        280        290        300 
AEVNGVETGR LPVANVVVTP AHEAVVRVGT KPGTEVPPVI DGSIWDAIAG CEAGGNWAIN 

       310        320        330        340        350        360 
TGNGYYGGVQ FDQGTWEANG GLRYAPRADL ATREEQIAVA EVTRLRQGWG AWPVCAARAG 


AR 

« Hide

References

« Hide 'large scale' references
[1]"Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence."
Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.M., Harris D.E., Gordon S.V., Eiglmeier K., Gas S., Barry C.E. III, Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T., Connor R., Davies R.M., Devlin K. expand/collapse author list , Feltwell T., Gentles S., Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J., Moule S., Murphy L.D., Oliver S., Osborne J., Quail M.A., Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton S., Squares S., Squares R., Sulston J.E., Taylor K., Whitehead S., Barrell B.G.
Nature 393:537-544(1998) [PubMed: 9634230] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25618 / H37Rv.
[2]"Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains."
Fleischmann R.D., Alland D., Eisen J.A., Carpenter L., White O., Peterson J., DeBoy R., Dodson R., Gwinn M., Haft D., Hickey E., Kolonay J.F., Nelson W.C., Umayam L.A., Ermolaeva M., Salzberg S.L., Delcher A., Utterback T. expand/collapse author list , Weidman J., Khouri H., Gill J., Mikula A., Bishai W., Jacobs Jr W.R. Jr, Venter J.C., Fraser C.M.
J. Bacteriol. 184:5479-5490(2002) [PubMed: 12218036] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CDC 1551 / Oshkosh.
[3]"The structure of a resuscitation-promoting factor domain from Mycobacterium tuberculosis shows homology to lysozymes."
Cohen-Gonsaud M., Barthe P., Bagneris C., Henderson B., Ward J., Roumestand C., Keep N.H.
Nat. Struct. Mol. Biol. 12:270-273(2005) [PubMed: 15723078] [Abstract]
Cited for: STRUCTURE BY NMR OF 255-362.
[4]"Crystal structure of the resuscitation-promoting factor (DeltaDUF)RpfB from M. tuberculosis."
Ruggiero A., Tizzano B., Pedone E., Pedone C., Wilmanns M., Berisio R.
J. Mol. Biol. 385:153-162(2009) [PubMed: 18992255] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.83 ANGSTROMS) OF 194-362.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000516 Genomic DNA. Translation: AAK45288.1.
BX842575 Genomic DNA. Translation: CAB08136.1.
PIRD70603.
RefSeqNP_215525.1. NC_000962.2.
NP_335474.1. NC_002755.2.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1XSFNMR-A255-362[»]
3EO5X-ray1.83A194-362[»]
ProteinModelPortalO05594.
SMRO05594. Positions 255-362.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBMYCT00000003494; EBMYCP00000003494; EBMYCG00000003492.
EBMYCT00000072827; EBMYCP00000070886; EBMYCG00000072822.
GeneID886048.
925164.
GenomeReviewsGene locus MT1038 in contig AE000516_GR.
Gene locus Rv1009 in contig AL123456_GR.
KEGGmtc:MT1038.
mtu:Rv1009.
PATRIC18124026. VBIMycTub22151_1135.
TIGRMT1038.

Organism-specific databases

TubercuListRv1009.

Phylogenomic databases

GeneTreeEBGT00050000014859.
HOGENOMHBG292401.
OMAWERQGGL.
ProtClustDBCLSK790891.

Family and domain databases

InterProIPR007137. DUF348.
IPR011098. G5.
IPR010618. Transglycosylas.
[Graphical view]
PfamPF03990. DUF348. 3 hits.
PF07501. G5. 1 hit.
PF06737. Transglycosylas. 1 hit.
[Graphical view]
PROSITEPS51109. G5. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO05594_MYCTU
AccessionPrimary (citable) accession number: O05594
Secondary accession number(s): Q7D900
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: December 14, 2011
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)