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O05524

- YDIK_BACSU

UniProt

O05524 - YDIK_BACSU

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Protein
Uncharacterized lipoprotein YdiK
Gene
ydiK, BSU06000
Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU06000-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein YdiK
Gene namesi
Name:ydiK
Ordered Locus Names:BSU06000
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU06000.

Subcellular locationi

Cell membrane; Lipid-anchor Reviewed prediction

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei34 – 5623Helical; Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1515 Reviewed prediction
Add
BLAST
Chaini16 – 6348Uncharacterized lipoprotein YdiK
PRO_0000013696Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi16 – 161N-palmitoyl cysteine Reviewed prediction
Lipidationi16 – 161S-diacylglycerol cysteine Reviewed prediction

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiO05524.

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU06000.

Family & Domainsi

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG75782.
HOGENOMiHOG000261714.
OMAiWGLIYFA.
OrthoDBiEOG6PW288.

Family and domain databases

InterProiIPR025426. DUF4305.
[Graphical view]
PfamiPF14146. DUF4305. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O05524-1 [UniParc]FASTAAdd to Basket

« Hide

MRNPVVWGMI YFAVGCIFTY LAASSPGSMW SFYSILLMVF AAYNISISFK   50
MFAFSFKIKK NQK 63
Length:63
Mass (Da):7,252
Last modified:July 1, 1997 - v1
Checksum:i1B4187154B13A4E8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D88802 Genomic DNA. Translation: BAA19724.1.
AL009126 Genomic DNA. Translation: CAB12419.1.
PIRiD69787.
RefSeqiNP_388481.1. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB12419; CAB12419; BSU06000.
GeneIDi939870.
KEGGibsu:BSU06000.
PATRICi18972832. VBIBacSub10457_0630.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D88802 Genomic DNA. Translation: BAA19724.1 .
AL009126 Genomic DNA. Translation: CAB12419.1 .
PIRi D69787.
RefSeqi NP_388481.1. NC_000964.3.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 224308.BSU06000.

Proteomic databases

PaxDbi O05524.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB12419 ; CAB12419 ; BSU06000 .
GeneIDi 939870.
KEGGi bsu:BSU06000.
PATRICi 18972832. VBIBacSub10457_0630.

Organism-specific databases

GenoListi BSU06000.

Phylogenomic databases

eggNOGi NOG75782.
HOGENOMi HOG000261714.
OMAi WGLIYFA.
OrthoDBi EOG6PW288.

Enzyme and pathway databases

BioCyci BSUB:BSU06000-MONOMER.

Family and domain databases

InterProi IPR025426. DUF4305.
[Graphical view ]
Pfami PF14146. DUF4305. 1 hit.
[Graphical view ]
PROSITEi PS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence and analysis of the phoB-rrnE-groESL region of the Bacillus subtilis chromosome."
    Sadaie Y., Yata K., Fujita M., Sagai H., Itaya M., Kasahara Y., Ogasawara N.
    Microbiology 143:1861-1866(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168 / JH642.
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiYDIK_BACSU
AccessioniPrimary (citable) accession number: O05524
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 11, 2003
Last sequence update: July 1, 1997
Last modified: May 14, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

External Data

Dasty 3

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