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Protein
Submitted name:

Mannosyl-transferase

Gene

RfbU

Organism
Vibrio cholerae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  • mannosyltransferase activity Source: TIGR
  • UDP-glucose 4-epimerase activity Source: UniProtKB-EC

GO - Biological processi

  • O antigen biosynthetic process Source: TIGR
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported, TransferaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Mannosyl-transferaseImported (EC:5.1.3.2Imported)
Submitted name:
Nucleoside-diphosphate sugar epimeraseImported
Gene namesi
Name:RfbUImported
Synonyms:capDImported
ORF Names:EN12_00685Imported, ERS013197_02267Imported, ERS013198_01139Imported, ERS013199_00674Imported, ERS013200_02033Imported, ERS013202_02857Imported, ERS013207_02845Imported
OrganismiVibrio choleraeImported
Taxonomic identifieri666 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000043247 Componenti: Unassembled WGS sequence
  • UP000038338 Componenti: Unassembled WGS sequence
  • UP000045578 Componenti: Unassembled WGS sequence
  • UP000044503 Componenti: Unassembled WGS sequence
  • UP000043560 Componenti: Unassembled WGS sequence
  • UP000041770 Componenti: Unassembled WGS sequence
  • UP000036184 Componenti: Chromosome 1

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei21 – 4020HelicalSequence analysisAdd
BLAST
Transmembranei52 – 7120HelicalSequence analysisAdd
BLAST
Transmembranei83 – 10927HelicalSequence analysisAdd
BLAST
Transmembranei115 – 13218HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi345073.VC0395_A2638.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini284 – 578295Polysacc_synt_2InterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C5E. Bacteria.
COG1086. LUCA.

Family and domain databases

Gene3Di3.40.50.720. 2 hits.
InterProiIPR016040. NAD(P)-bd_dom.
IPR003869. Polysac_CapD-like.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF02719. Polysacc_synt_2. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.
SSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

O05349-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFTPIQLLLS AQRHHKRMIT LLYDVFALMF SLYAAIALRL DTLAFTFSFP
60 70 80 90 100
EFLSMMTTVG VTLYCFVRLG MYRAVLRYMM LPAIGYIFLS VIISAVTLAL
110 120 130 140 150
SGFFFQAFIP RSVPFIYAGL ATLTLGGPRI FIRTIYYHYY KRQKPNVFIY
160 170 180 190 200
GAGSTGRDLA YALIQGDEYH PVIFLDDDPA KTGQIIFGLR VHHSSDFESL
210 220 230 240 250
RNLYEPVKML IAINNIGKNT RIKLLERLSH WPIEIQSVPS VEDIAAGRAK
260 270 280 290 300
ATDVQDLDIA DLLGRAPVEP DLALLQKNIT EKSVMVTGAG GSIGSELCRQ
310 320 330 340 350
ILAQKPKTLV LFELNEYNLY TIDQELQAIK QNLKLNTKIV AALGSVQREN
360 370 380 390 400
RVKKLMQAHQ VETVYHAAAY KHVPLVEDNV IEGIRNNVFG TLACANAAIE
410 420 430 440 450
AGVKNFTLIS TDKAVRPTNI MGASKRMAEL VLQALADKNS TTIFTMVRFG
460 470 480 490 500
NVLGSSGSVV PLFKKQIRAG GPVTVTHPDI IRYFMLIPEA AQLVIQAGAM
510 520 530 540 550
SHNGQVFVLD MGEPVKIVDL AKRMIHLMGM KEFCDGRSDE GDIEIKFTGL
560 570 580 590 600
RPGEKLYEEL LIGENVEGTS HQKIMTACEE KLSWDAMEDL LTELDVCCHN
610 620
FDVECIKRIL LDAPTGYSPQ K
Length:621
Mass (Da):69,231
Last modified:July 1, 1997 - v1
Checksum:i561D084B91F5C068
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP007653 Genomic DNA. Translation: AKO73811.1.
Y07788 Genomic DNA. Translation: CAA69127.1.
CWQA01000004 Genomic DNA. Translation: CSB69288.1.
CWQX01000005 Genomic DNA. Translation: CSC07878.1.
CWQC01000008 Genomic DNA. Translation: CSC20786.1.
CWQG01000014 Genomic DNA. Translation: CSC39897.1.
CWPZ01000018 Genomic DNA. Translation: CSC50377.1.
CWQY01000012 Genomic DNA. Translation: CSC69781.1.
PIRiB82345.
RefSeqiWP_000494952.1. NZ_LRBH01000012.1.

Genome annotation databases

EnsemblBacteriaiAKO73811; AKO73811; EN12_00685.
CRZ49672; CRZ49672; ERS013276_02830.
CRZ50838; CRZ50838; ERS013128_02387.
CRZ52586; CRZ52586; ERS013250_02833.
CRZ53338; CRZ53338; ERS013242_03074.
CRZ60877; CRZ60877; ERS013162_00060.
CRZ62028; CRZ62028; ERS013171_00368.
CRZ64551; CRZ64551; ERS013172_00034.
CRZ85276; CRZ85276; ERS013127_01367.
CSA05198; CSA05198; ERS013261_01198.
CSA30929; CSA30929; ERS013169_01904.
CSA32068; CSA32068; ERS013132_01062.
CSA34410; CSA34410; ERS013167_01732.
CSA36401; CSA36401; ERS013160_02362.
CSA40741; CSA40741; ERS013260_02094.
CSA41972; CSA41972; ERS013181_02580.
CSA42531; CSA42531; ERS013129_02345.
CSA50863; CSA50863; ERS013163_02617.
CSA51160; CSA51160; ERS013135_02455.
CSA54368; CSA54368; ERS013131_02234.
CSA56416; CSA56416; ERS013180_02941.
CSA59340; CSA59340; ERS013182_03121.
CSA62285; CSA62285; ERS013133_02106.
CSA62501; CSA62501; ERS013126_02446.
CSA63673; CSA63673; ERS013161_01370.
CSA72023; CSA72023; ERS013134_02863.
CSA72189; CSA72189; ERS013170_02336.
CSA72979; CSA72979; ERS013175_02488.
CSA73725; CSA73725; ERS013130_02762.
CSA75888; CSA75888; ERS013179_02707.
CSA79176; CSA79176; ERS013168_01964.
CSA79877; CSA79877; ERS013254_02885.
CSA83634; CSA83634; ERS013253_02467.
CSA88976; CSA88976; ERS013259_02828.
CSA89252; CSA89252; ERS013183_02744.
CSA89283; CSA89283; ERS013257_02801.
CSA91884; CSA91884; ERS013174_02767.
CSA98466; CSA98466; ERS013258_02892.
CSB05806; CSB05806; ERS013252_03049.
CSB06774; CSB06774; ERS013255_03505.
CSB26371; CSB26371; ERS013191_00515.
CSB31294; CSB31294; ERS016137_03410.
CSB49781; CSB49781; ERS013203_00033.
CSB50870; CSB50870; ERS013184_02615.
CSB65140; CSB65140; ERS013189_02524.
CSB69288; CSB69288; ERS013198_01139.
CSB72950; CSB72950; ERS013194_02232.
CSB73075; CSB73075; ERS013185_03329.
CSB83813; CSB83813; ERS013190_02075.
CSB84025; CSB84025; ERS013196_02439.
CSB86599; CSB86599; ERS013187_02579.
CSB89366; CSB89366; ERS013195_02832.
CSB96053; CSB96053; ERS013136_02072.
CSC03514; CSC03514; ERS013209_01446.
CSC07878; CSC07878; ERS013199_00674.
CSC16061; CSC16061; ERS013188_02512.
CSC18594; CSC18594; ERS013192_03128.
CSC18933; CSC18933; ERS013146_02474.
CSC20786; CSC20786; ERS013197_02267.
CSC21352; CSC21352; ERS013145_02834.
CSC28387; CSC28387; ERS013218_02957.
CSC31269; CSC31269; ERS013147_02165.
CSC33354; CSC33354; ERS013143_02350.
CSC38279; CSC38279; ERS013139_02468.
CSC39897; CSC39897; ERS013202_02857.
CSC50377; CSC50377; ERS013207_02845.
CSC50597; CSC50597; ERS013205_02753.
CSC53096; CSC53096; ERS013142_02102.
CSC55190; CSC55190; ERS013212_02724.
CSC56016; CSC56016; ERS013213_02327.
CSC61546; CSC61546; ERS013217_02805.
CSC69781; CSC69781; ERS013200_02033.
CSC85759; CSC85759; ERS013219_03434.
CSC87633; CSC87633; ERS013141_02900.
CSC89569; CSC89569; ERS013211_02698.
CSC91805; CSC91805; ERS013226_02664.
CSD05478; CSD05478; ERS013224_02468.
CSD06897; CSD06897; ERS013221_03182.
CSD40836; CSD40836; ERS013237_01654.
CSD55358; CSD55358; ERS013268_02487.
CSD55646; CSD55646; ERS013265_03141.
CSD61416; CSD61416; ERS013266_02738.
CSD64317; CSD64317; ERS013273_02977.
CSD66935; CSD66935; ERS013232_02947.
CSD68445; CSD68445; ERS013234_02852.
CSD71446; CSD71446; ERS013236_02681.
CSD71891; CSD71891; ERS013241_03068.
CSD71938; CSD71938; ERS013267_02955.
CSD73806; CSD73806; ERS013269_02713.
CSD74919; CSD74919; ERS013270_02809.
CSD76255; CSD76255; ERS013235_02757.
CSD82194; CSD82194; ERS013238_02855.
CSD83011; CSD83011; ERS013244_02320.
CSD88014; CSD88014; ERS013271_02926.
CSD95123; CSD95123; ERS013233_02758.
CSE00666; CSE00666; ERS013239_02728.
CSE07557; CSE07557; ERS013240_02836.
CSE08599; CSE08599; ERS013246_03046.
CSE08614; CSE08614; ERS013248_02857.
CSE10093; CSE10093; ERS013247_03254.
CSE10429; CSE10429; ERS013281_02080.
CSE12320; CSE12320; ERS013251_02841.
CSE13493; CSE13493; ERS013279_02670.
CSE15300; CSE15300; ERS013277_03141.
CSE16274; CSE16274; ERS013278_02946.
CSE16293; CSE16293; ERS013245_02913.
CSE17016; CSE17016; ERS013243_03120.
CSE19933; CSE19933; ERS013249_03352.
CSE20967; CSE20967; ERS013274_02971.
CSE21773; CSE21773; ERS013275_03079.
CSE25268; CSE25268; ERS013280_03027.
CSE25390; CSE25390; ERS013282_02698.
KEGGivcq:EN18_18180.
PATRICi20079562. VBIVibCho83274_0240.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP007653 Genomic DNA. Translation: AKO73811.1.
Y07788 Genomic DNA. Translation: CAA69127.1.
CWQA01000004 Genomic DNA. Translation: CSB69288.1.
CWQX01000005 Genomic DNA. Translation: CSC07878.1.
CWQC01000008 Genomic DNA. Translation: CSC20786.1.
CWQG01000014 Genomic DNA. Translation: CSC39897.1.
CWPZ01000018 Genomic DNA. Translation: CSC50377.1.
CWQY01000012 Genomic DNA. Translation: CSC69781.1.
PIRiB82345.
RefSeqiWP_000494952.1. NZ_LRBH01000012.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi345073.VC0395_A2638.

Protocols and materials databases

DNASUi2614878.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAKO73811; AKO73811; EN12_00685.
CRZ49672; CRZ49672; ERS013276_02830.
CRZ50838; CRZ50838; ERS013128_02387.
CRZ52586; CRZ52586; ERS013250_02833.
CRZ53338; CRZ53338; ERS013242_03074.
CRZ60877; CRZ60877; ERS013162_00060.
CRZ62028; CRZ62028; ERS013171_00368.
CRZ64551; CRZ64551; ERS013172_00034.
CRZ85276; CRZ85276; ERS013127_01367.
CSA05198; CSA05198; ERS013261_01198.
CSA30929; CSA30929; ERS013169_01904.
CSA32068; CSA32068; ERS013132_01062.
CSA34410; CSA34410; ERS013167_01732.
CSA36401; CSA36401; ERS013160_02362.
CSA40741; CSA40741; ERS013260_02094.
CSA41972; CSA41972; ERS013181_02580.
CSA42531; CSA42531; ERS013129_02345.
CSA50863; CSA50863; ERS013163_02617.
CSA51160; CSA51160; ERS013135_02455.
CSA54368; CSA54368; ERS013131_02234.
CSA56416; CSA56416; ERS013180_02941.
CSA59340; CSA59340; ERS013182_03121.
CSA62285; CSA62285; ERS013133_02106.
CSA62501; CSA62501; ERS013126_02446.
CSA63673; CSA63673; ERS013161_01370.
CSA72023; CSA72023; ERS013134_02863.
CSA72189; CSA72189; ERS013170_02336.
CSA72979; CSA72979; ERS013175_02488.
CSA73725; CSA73725; ERS013130_02762.
CSA75888; CSA75888; ERS013179_02707.
CSA79176; CSA79176; ERS013168_01964.
CSA79877; CSA79877; ERS013254_02885.
CSA83634; CSA83634; ERS013253_02467.
CSA88976; CSA88976; ERS013259_02828.
CSA89252; CSA89252; ERS013183_02744.
CSA89283; CSA89283; ERS013257_02801.
CSA91884; CSA91884; ERS013174_02767.
CSA98466; CSA98466; ERS013258_02892.
CSB05806; CSB05806; ERS013252_03049.
CSB06774; CSB06774; ERS013255_03505.
CSB26371; CSB26371; ERS013191_00515.
CSB31294; CSB31294; ERS016137_03410.
CSB49781; CSB49781; ERS013203_00033.
CSB50870; CSB50870; ERS013184_02615.
CSB65140; CSB65140; ERS013189_02524.
CSB69288; CSB69288; ERS013198_01139.
CSB72950; CSB72950; ERS013194_02232.
CSB73075; CSB73075; ERS013185_03329.
CSB83813; CSB83813; ERS013190_02075.
CSB84025; CSB84025; ERS013196_02439.
CSB86599; CSB86599; ERS013187_02579.
CSB89366; CSB89366; ERS013195_02832.
CSB96053; CSB96053; ERS013136_02072.
CSC03514; CSC03514; ERS013209_01446.
CSC07878; CSC07878; ERS013199_00674.
CSC16061; CSC16061; ERS013188_02512.
CSC18594; CSC18594; ERS013192_03128.
CSC18933; CSC18933; ERS013146_02474.
CSC20786; CSC20786; ERS013197_02267.
CSC21352; CSC21352; ERS013145_02834.
CSC28387; CSC28387; ERS013218_02957.
CSC31269; CSC31269; ERS013147_02165.
CSC33354; CSC33354; ERS013143_02350.
CSC38279; CSC38279; ERS013139_02468.
CSC39897; CSC39897; ERS013202_02857.
CSC50377; CSC50377; ERS013207_02845.
CSC50597; CSC50597; ERS013205_02753.
CSC53096; CSC53096; ERS013142_02102.
CSC55190; CSC55190; ERS013212_02724.
CSC56016; CSC56016; ERS013213_02327.
CSC61546; CSC61546; ERS013217_02805.
CSC69781; CSC69781; ERS013200_02033.
CSC85759; CSC85759; ERS013219_03434.
CSC87633; CSC87633; ERS013141_02900.
CSC89569; CSC89569; ERS013211_02698.
CSC91805; CSC91805; ERS013226_02664.
CSD05478; CSD05478; ERS013224_02468.
CSD06897; CSD06897; ERS013221_03182.
CSD40836; CSD40836; ERS013237_01654.
CSD55358; CSD55358; ERS013268_02487.
CSD55646; CSD55646; ERS013265_03141.
CSD61416; CSD61416; ERS013266_02738.
CSD64317; CSD64317; ERS013273_02977.
CSD66935; CSD66935; ERS013232_02947.
CSD68445; CSD68445; ERS013234_02852.
CSD71446; CSD71446; ERS013236_02681.
CSD71891; CSD71891; ERS013241_03068.
CSD71938; CSD71938; ERS013267_02955.
CSD73806; CSD73806; ERS013269_02713.
CSD74919; CSD74919; ERS013270_02809.
CSD76255; CSD76255; ERS013235_02757.
CSD82194; CSD82194; ERS013238_02855.
CSD83011; CSD83011; ERS013244_02320.
CSD88014; CSD88014; ERS013271_02926.
CSD95123; CSD95123; ERS013233_02758.
CSE00666; CSE00666; ERS013239_02728.
CSE07557; CSE07557; ERS013240_02836.
CSE08599; CSE08599; ERS013246_03046.
CSE08614; CSE08614; ERS013248_02857.
CSE10093; CSE10093; ERS013247_03254.
CSE10429; CSE10429; ERS013281_02080.
CSE12320; CSE12320; ERS013251_02841.
CSE13493; CSE13493; ERS013279_02670.
CSE15300; CSE15300; ERS013277_03141.
CSE16274; CSE16274; ERS013278_02946.
CSE16293; CSE16293; ERS013245_02913.
CSE17016; CSE17016; ERS013243_03120.
CSE19933; CSE19933; ERS013249_03352.
CSE20967; CSE20967; ERS013274_02971.
CSE21773; CSE21773; ERS013275_03079.
CSE25268; CSE25268; ERS013280_03027.
CSE25390; CSE25390; ERS013282_02698.
KEGGivcq:EN18_18180.
PATRICi20079562. VBIVibCho83274_0240.

Phylogenomic databases

eggNOGiENOG4105C5E. Bacteria.
COG1086. LUCA.

Family and domain databases

Gene3Di3.40.50.720. 2 hits.
InterProiIPR016040. NAD(P)-bd_dom.
IPR003869. Polysac_CapD-like.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF02719. Polysacc_synt_2. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.
SSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO05349_VIBCL
AccessioniPrimary (citable) accession number: O05349
Secondary accession number(s): Q7DCX4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: September 7, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.