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O05349 (O05349_VIBCL) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:RfbU EMBL CAA69127.1
OrganismVibrio cholerae EMBL CAA69127.1
Taxonomic identifier666 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length621 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
O05349 [UniParc].

Last modified July 1, 1997. Version 1.
Checksum: 561D084B91F5C068

FASTA62169,231
        10         20         30         40         50         60 
MFTPIQLLLS AQRHHKRMIT LLYDVFALMF SLYAAIALRL DTLAFTFSFP EFLSMMTTVG 

        70         80         90        100        110        120 
VTLYCFVRLG MYRAVLRYMM LPAIGYIFLS VIISAVTLAL SGFFFQAFIP RSVPFIYAGL 

       130        140        150        160        170        180 
ATLTLGGPRI FIRTIYYHYY KRQKPNVFIY GAGSTGRDLA YALIQGDEYH PVIFLDDDPA 

       190        200        210        220        230        240 
KTGQIIFGLR VHHSSDFESL RNLYEPVKML IAINNIGKNT RIKLLERLSH WPIEIQSVPS 

       250        260        270        280        290        300 
VEDIAAGRAK ATDVQDLDIA DLLGRAPVEP DLALLQKNIT EKSVMVTGAG GSIGSELCRQ 

       310        320        330        340        350        360 
ILAQKPKTLV LFELNEYNLY TIDQELQAIK QNLKLNTKIV AALGSVQREN RVKKLMQAHQ 

       370        380        390        400        410        420 
VETVYHAAAY KHVPLVEDNV IEGIRNNVFG TLACANAAIE AGVKNFTLIS TDKAVRPTNI 

       430        440        450        460        470        480 
MGASKRMAEL VLQALADKNS TTIFTMVRFG NVLGSSGSVV PLFKKQIRAG GPVTVTHPDI 

       490        500        510        520        530        540 
IRYFMLIPEA AQLVIQAGAM SHNGQVFVLD MGEPVKIVDL AKRMIHLMGM KEFCDGRSDE 

       550        560        570        580        590        600 
GDIEIKFTGL RPGEKLYEEL LIGENVEGTS HQKIMTACEE KLSWDAMEDL LTELDVCCHN 

       610        620 
FDVECIKRIL LDAPTGYSPQ K 

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References

[1]"Identification of additional genes required for O-antigen biosynthesis in Vibrio cholerae O1."
Fallarino A., Mavrangelos C., Stroeher U.H., Manning P.A.
J. Bacteriol. 179:2147-2153(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 569B EMBL CAA69127.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Y07788 Genomic DNA. Translation: CAA69127.1.
PIRB82345.

3D structure databases

ProteinModelPortalO05349.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243277.VC0260.

Protocols and materials databases

DNASU2614878.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

PATRIC20079562. VBIVibCho83274_0240.

Phylogenomic databases

ProtClustDBCLSK793548.

Family and domain databases

Gene3D3.40.50.720. 2 hits.
InterProIPR016040. NAD(P)-bd_dom.
IPR003869. Polysac_CapD-like.
[Graphical view]
PfamPF02719. Polysacc_synt_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO05349_VIBCL
AccessionPrimary (citable) accession number: O05349
Secondary accession number(s): Q7DCX4
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: May 29, 2013
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)