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O05290

- P13_MYCMY

UniProt

O05290 - P13_MYCMY

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Protein

Probable UPF0122 protein

Gene
N/A
Organism
Mycoplasma mycoides
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein By similarity.UniRule annotation

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. sequence-specific DNA binding transcription factor activity Source: InterPro
  3. sigma factor activity Source: InterPro

GO - Biological processi

  1. DNA-templated transcription, initiation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Probable UPF0122 protein
Alternative name(s):
p13
OrganismiMycoplasma mycoides
Taxonomic identifieri2102 [NCBI]
Taxonomic lineageiBacteriaTenericutesMollicutesMycoplasmataceaeMycoplasma

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 113113Probable UPF0122 proteinUniRule annotationPRO_0000211872Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliO05290.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0122 family.

Phylogenomic databases

eggNOGiCOG2739.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
HAMAPiMF_00245. UPF0122.
InterProiIPR013324. RNA_pol_sigma_r3_r4.
IPR007394. UPF0122.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF04297. UPF0122. 1 hit.
[Graphical view]
SUPFAMiSSF88659. SSF88659. 1 hit.

Sequencei

Sequence statusi: Complete.

O05290-1 [UniParc]FASTAAdd to Basket

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MKLKNNLLEK TLELSELFKI YKELLTDKQK QYFELYIDED LSLSEIADEF    50
NISKTAVYDS ISKTSKLLFS LETKLHLKQK QDLLISLINK IETNQIDEKQ 100
FIKSLKEVIW WKY 113
Length:113
Mass (Da):13,538
Last modified:July 1, 1997 - v1
Checksum:i3564846C55149BB3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Y10137 Genomic DNA. Translation: CAA71225.1.
PIRiJC5411.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Y10137 Genomic DNA. Translation: CAA71225.1 .
PIRi JC5411.

3D structure databases

ProteinModelPortali O05290.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

eggNOGi COG2739.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
HAMAPi MF_00245. UPF0122.
InterProi IPR013324. RNA_pol_sigma_r3_r4.
IPR007394. UPF0122.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF04297. UPF0122. 1 hit.
[Graphical view ]
SUPFAMi SSF88659. SSF88659. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A 13-kDa protein with a helix-turn-helix motif is encoded by bacterial operons related to the SRP pathway."
    Samuelsson T., Macao B., Boelske G.
    Biochem. Biophys. Res. Commun. 231:839-843(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiP13_MYCMY
AccessioniPrimary (citable) accession number: O05290
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: July 1, 1997
Last modified: February 19, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

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