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O05242

- O16G3_BACSU

UniProt

O05242 - O16G3_BACSU

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Protein

Probable oligo-1,6-glucosidase 3

Gene
yugT, BSU31290
Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of (1->6)-alpha-D-glucosidic linkages in some oligosaccharides produced from starch and glycogen by alpha-amylase, and in isomaltose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei199 – 1991Nucleophile By similarity
Active sitei256 – 2561Proton donor By similarity
Sitei326 – 3261Transition state stabilizer By similarity

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. oligo-1,6-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Enzyme and pathway databases

BioCyciBSUB:BSU31290-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable oligo-1,6-glucosidase 3 (EC:3.2.1.10)
Alternative name(s):
Oligosaccharide alpha-1,6-glucosidase 3
Sucrase-isomaltase 3
Short name:
Isomaltase 3
Gene namesi
Name:yugT
Ordered Locus Names:BSU31290
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU31290.

Subcellular locationi

Cytoplasm By similarity

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 554554Probable oligo-1,6-glucosidase 3PRO_0000361649Add
BLAST

Proteomic databases

PaxDbiO05242.

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU31290.

Structurei

3D structure databases

ProteinModelPortaliO05242.
SMRiO05242. Positions 2-553.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000220641.
KOiK01187.
OrthoDBiEOG6RVFV2.
PhylomeDBiO05242.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

O05242-1 [UniParc]FASTAAdd to Basket

« Hide

MKKAWWKEAV VYQIYPRSFK DSNGDGIGDI QGIRTKLSYI KELGADVIWI    50
CPLYDSPNAD NGYDIRDYQN ILSEFGTMED FDELLGDIHD LDMKLIMDLV 100
VNHTSDEHPW FIESRSSIHS EKRDWYIWKD GKNGKTPNNW ESIFGGPAWE 150
YDQKTSQYYL HLFDKKQPDL NWENEKVRNA VYDMINWWLD KGIDGFRVDA 200
ITHIKKKEGF PDMPNPKGLD YVPSFPYHMN ADGIMDLLTE LKENTFSRYP 250
IMTVGEANGV AAKEAADWAG EKNGIFSMIF QFEHLGLWDV EINESIDIVA 300
FKRILTDWQD SLEGIGWNAL FMENHDQPRS VSVWGDDGVY LKESAKALSA 350
VYFLMKGTPF IYQGQELGMT NVAFPSIEDY DDVALKRLYE TKTAKGTSHE 400
DVMKIVWKKG RDNSRTPMQW NAGPYAGFSE AKPWIGINEN YKWLNAEAQK 450
NDKTSVYHFY KSLIKLRQTY DVFINGTYEL ILPEDQQIFA YLRKNESHTA 500
LIAANLTGTP ALFRHSGLPL SSDALVLSNI ETEPHKHMTS VLLKPYEARI 550
YLWC 554
Length:554
Mass (Da):63,969
Last modified:July 28, 2009 - v2
Checksum:i67AD34910C96B6B7
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti262 – 2621A → P in CAB07926. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z93935 Genomic DNA. Translation: CAB07926.1.
AL009126 Genomic DNA. Translation: CAB15118.2.
PIRiH70011.
RefSeqiNP_391007.2. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB15118; CAB15118; BSU31290.
GeneIDi938857.
KEGGibsu:BSU31290.
PATRICi18978222. VBIBacSub10457_3274.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z93935 Genomic DNA. Translation: CAB07926.1 .
AL009126 Genomic DNA. Translation: CAB15118.2 .
PIRi H70011.
RefSeqi NP_391007.2. NC_000964.3.

3D structure databases

ProteinModelPortali O05242.
SMRi O05242. Positions 2-553.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224308.BSU31290.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Proteomic databases

PaxDbi O05242.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB15118 ; CAB15118 ; BSU31290 .
GeneIDi 938857.
KEGGi bsu:BSU31290.
PATRICi 18978222. VBIBacSub10457_3274.

Organism-specific databases

GenoListi BSU31290.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000220641.
KOi K01187.
OrthoDBi EOG6RVFV2.
PhylomeDBi O05242.

Enzyme and pathway databases

BioCyci BSUB:BSU31290-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the Bacillus subtilis genome: cloning and nucleotide sequence of a 62 kb region between 275 degrees (rrnB) and 284 degrees (pai)."
    Oudega B., Koningstein G., Rodrigues L., de Sales Ramon M., Hilbert H., Duesterhoeft A., Pohl T.M., Weitzenegger T.
    Microbiology 143:2769-2774(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  3. "From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later."
    Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A., Vallenet D., Wang T., Moszer I., Medigue C., Danchin A.
    Microbiology 155:1758-1775(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: SEQUENCE REVISION TO 262.

Entry informationi

Entry nameiO16G3_BACSU
AccessioniPrimary (citable) accession number: O05242
Secondary accession number(s): Q795N0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: July 28, 2009
Last modified: July 9, 2014
This is version 92 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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