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Protein

Major pollen allergen Cyn d 1

Gene

CYND1

Organism
Cynodon dactylon (Bermuda grass) (Panicum dactylon)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Major pollen allergen Cyn d 1
Alternative name(s):
Allergen: Cyn d 1
Gene namesi
Name:CYND1
OrganismiCynodon dactylon (Bermuda grass) (Panicum dactylon)
Taxonomic identifieri28909 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladeChloridoideaeCynodonteaeEleusininaeCynodon

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

Pathology & Biotechi

Allergenic propertiesi

Causes an allergic reaction in human. Causes grass pollen allergy. Binds to IgE.

Keywords - Diseasei

Allergen

Protein family/group databases

Allergomei266 Cyn d 1
267 Cyn d 1.0101

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001545691 – 246Major pollen allergen Cyn d 1Add BLAST246

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi9N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PRIDEiO04701

Structurei

3D structure databases

ProteinModelPortaliO04701
SMRiO04701
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini39 – 145Expansin-like EG45PROSITE-ProRule annotationAdd BLAST107
Domaini159 – 240Expansin-like CBDPROSITE-ProRule annotationAdd BLAST82

Sequence similaritiesi

Belongs to the expansin family. Expansin B subfamily.Curated

Family and domain databases

Gene3Di2.40.40.10, 1 hit
2.60.40.760, 1 hit
InterProiView protein in InterPro
IPR007118 Expan_Lol_pI
IPR007112 Expansin/allergen_DPBB_dom
IPR007117 Expansin_CBD
IPR036749 Expansin_CBD_sf
IPR005795 LolPI
IPR009009 RlpA-like_DPBB
IPR036908 RlpA-like_sf
PfamiView protein in Pfam
PF03330 DPBB_1, 1 hit
PF01357 Pollen_allerg_1, 1 hit
PRINTSiPR01225 EXPANSNFAMLY
PR00829 LOLP1ALLERGN
SMARTiView protein in SMART
SM00837 DPBB_1, 1 hit
SUPFAMiSSF49590 SSF49590, 1 hit
SSF50685 SSF50685, 1 hit
PROSITEiView protein in PROSITE
PS50843 EXPANSIN_CBD, 1 hit
PS50842 EXPANSIN_EG45, 1 hit

Sequencei

Sequence statusi: Complete.

O04701-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
AIGDKPGPNI TATYGSKWLE ARATFYGSNP RGAAPDDHGG ACGYKDVDKP
60 70 80 90 100
PFDGMTACGN EPIFKDGLGC RACYEIKCKE PVECSGEPVL VKITDKNYEH
110 120 130 140 150
IAAYHFDLSG KAFGAMAKKG QEDKLRKAGE LTLQFRRVKC KYPSGTKITF
160 170 180 190 200
HIEKGSNDHY LALLVKYAAG DGNIVAVDIK PRDSDEFIPM KSSWGAIWRI
210 220 230 240
DPKKPLKGPF SIRLTSEGGA HLVQDDVIPA NWKPDTVYTS KLQFGA
Length:246
Mass (Da):26,889
Last modified:July 1, 1997 - v1
Checksum:i43D8442DBA588322
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S83343 mRNA Translation: AAB50734.2

Similar proteinsi

Entry informationi

Entry nameiMPAC1_CYNDA
AccessioniPrimary (citable) accession number: O04701
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 20, 2001
Last sequence update: July 1, 1997
Last modified: March 28, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Direct protein sequencing
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Main funding by: National Institutes of Health