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Protein

Pathogenesis-related genes transcriptional activator PTI6

Gene

PTI6

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Activates the defense genes of plants.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi97 – 154AP2/ERFPROSITE-ProRule annotationAdd BLAST58

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processPlant defense, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Pathogenesis-related genes transcriptional activator PTI6
Alternative name(s):
PTO-interacting protein 6
Gene namesi
Name:PTI6
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
Proteomesi

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001125681 – 248Pathogenesis-related genes transcriptional activator PTI6Add BLAST248

Proteomic databases

PaxDbiO04682

Interactioni

Subunit structurei

Interacts with the Pto kinase.

Protein-protein interaction databases

STRINGi4081.Solyc06g082590.1.1

Structurei

3D structure databases

ProteinModelPortaliO04682
SMRiO04682
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi81 – 97Nuclear localization signalAdd BLAST17

Phylogenomic databases

eggNOGiENOG410IYB6 Eukaryota
ENOG410YQGI LUCA
InParanoidiO04682
KOiK13434
OMAiNTVRRVK
OrthoDBiEOG09360MT1

Family and domain databases

CDDicd00018 AP2, 1 hit
Gene3Di3.30.730.10, 1 hit
InterProiView protein in InterPro
IPR017392 AP2/ERF-transcript_factor
IPR001471 AP2/ERF_dom
IPR036955 AP2/ERF_dom_sf
IPR016177 DNA-bd_dom_sf
PfamiView protein in Pfam
PF00847 AP2, 1 hit
PIRSFiPIRSF038123 PTI6, 1 hit
PRINTSiPR00367 ETHRSPELEMNT
SMARTiView protein in SMART
SM00380 AP2, 1 hit
SUPFAMiSSF54171 SSF54171, 1 hit
PROSITEiView protein in PROSITE
PS51032 AP2_ERF, 1 hit

Sequencei

Sequence statusi: Complete.

O04682-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTENSVPVIK FTQHIVTTNK HVFSEHNEKS NSELQRVVRI ILTDADATDS
60 70 80 90 100
SDDEGRNTVR RVKRHVTEIN LMPSTKSIGD RKRRSVSPDS DVTRRKKFRG
110 120 130 140 150
VRQRPWGRWA AEIRDPTRGK RVWLGTYDTP EEAAVVYDKA AVKLKGPDAV
160 170 180 190 200
TNFPVSTTAE VTVTVTETET ESVADGGDKS ENDVALSPTS VLCDNDFAPF
210 220 230 240
DNLGFCEVDA FGFDVDSLFR LPDFAMTEKY YGDEFGEFDF DDFALEAR
Length:248
Mass (Da):27,913
Last modified:July 1, 1997 - v1
Checksum:i115BD44DDEB1B992
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U89257 mRNA Translation: AAC49741.1
PIRiT07728
RefSeqiNP_001233991.1, NM_001247062.2
UniGeneiLes.3574

Genome annotation databases

EnsemblPlantsiSolyc06g082590.1.1; Solyc06g082590.1.1; Solyc06g082590.1
GeneIDi544043
GrameneiSolyc06g082590.1.1; Solyc06g082590.1.1; Solyc06g082590.1
KEGGisly:544043

Similar proteinsi

Entry informationi

Entry nameiPTI6_SOLLC
AccessioniPrimary (citable) accession number: O04682
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: July 1, 1997
Last modified: March 28, 2018
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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