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Protein

Pathogenesis-related genes transcriptional activator PTI6

Gene

PTI6

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Activates the defense genes of plants.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi97 – 154AP2/ERFPROSITE-ProRule annotationAdd BLAST58

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processPlant defense, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Pathogenesis-related genes transcriptional activator PTI6
Alternative name(s):
PTO-interacting protein 6
Gene namesi
Name:PTI6
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
Proteomesi
  • UP000004994 Componenti: Chromosome 6

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001125681 – 248Pathogenesis-related genes transcriptional activator PTI6Add BLAST248

Proteomic databases

PaxDbiO04682.

Interactioni

Subunit structurei

Interacts with the Pto kinase.

Protein-protein interaction databases

STRINGi4081.Solyc06g082590.1.1.

Structurei

3D structure databases

ProteinModelPortaliO04682.
SMRiO04682.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi81 – 97Nuclear localization signalAdd BLAST17

Phylogenomic databases

eggNOGiENOG410IYB6. Eukaryota.
ENOG410YQGI. LUCA.
InParanoidiO04682.
KOiK13434.
OMAiVTEINLM.
OrthoDBiEOG09360MT1.

Family and domain databases

CDDicd00018. AP2. 1 hit.
Gene3Di3.30.730.10. 1 hit.
InterProiView protein in InterPro
IPR017392. AP2/ERF-transcript_factor.
IPR001471. AP2/ERF_dom.
IPR016177. DNA-bd_dom.
PfamiView protein in Pfam
PF00847. AP2. 1 hit.
PIRSFiPIRSF038123. PTI6. 1 hit.
PRINTSiPR00367. ETHRSPELEMNT.
SMARTiView protein in SMART
SM00380. AP2. 1 hit.
SUPFAMiSSF54171. SSF54171. 1 hit.
PROSITEiView protein in PROSITE
PS51032. AP2_ERF. 1 hit.

Sequencei

Sequence statusi: Complete.

O04682-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTENSVPVIK FTQHIVTTNK HVFSEHNEKS NSELQRVVRI ILTDADATDS
60 70 80 90 100
SDDEGRNTVR RVKRHVTEIN LMPSTKSIGD RKRRSVSPDS DVTRRKKFRG
110 120 130 140 150
VRQRPWGRWA AEIRDPTRGK RVWLGTYDTP EEAAVVYDKA AVKLKGPDAV
160 170 180 190 200
TNFPVSTTAE VTVTVTETET ESVADGGDKS ENDVALSPTS VLCDNDFAPF
210 220 230 240
DNLGFCEVDA FGFDVDSLFR LPDFAMTEKY YGDEFGEFDF DDFALEAR
Length:248
Mass (Da):27,913
Last modified:July 1, 1997 - v1
Checksum:i115BD44DDEB1B992
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U89257 mRNA. Translation: AAC49741.1.
PIRiT07728.
RefSeqiNP_001233991.1. NM_001247062.2.
UniGeneiLes.3574.

Genome annotation databases

EnsemblPlantsiSolyc06g082590.1.1; Solyc06g082590.1.1; Solyc06g082590.1.
GeneIDi544043.
GrameneiSolyc06g082590.1.1; Solyc06g082590.1.1; Solyc06g082590.1.
KEGGisly:544043.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiPTI6_SOLLC
AccessioniPrimary (citable) accession number: O04682
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: July 1, 1997
Last modified: March 15, 2017
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome