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Protein
Submitted name:

At1g70000

Gene

At1g70000

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • chromatin binding Source: TAIR
  • DNA binding Source: UniProtKB-KW
  • transcription factor activity, sequence-specific DNA binding Source: TAIR
  • zinc ion binding Source: InterPro

GO - Biological processi

  • regulation of anthocyanin biosynthetic process Source: TAIR
  • regulation of transcription, DNA-templated Source: TAIR
  • response to abscisic acid Source: TAIR
  • response to auxin Source: TAIR
  • response to cadmium ion Source: TAIR
  • response to ethylene Source: TAIR
  • response to gibberellin Source: TAIR
  • response to jasmonic acid Source: TAIR
  • response to karrikin Source: TAIR
  • response to salicylic acid Source: TAIR
  • response to salt stress Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
At1g70000Imported
Submitted name:
F20P5.26 proteinImported
Submitted name:
MYB transcription factorImported
Submitted name:
Myb-like transcription factor family proteinImported
Submitted name:
Putative uncharacterized protein At1g70000Imported
Gene namesi
Ordered Locus Names:At1g70000Imported
ORF Names:F20P5.26Imported, F20P5_26Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G70000.
TAIRilocus:2020653. AT1G70000.

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

  • nucleus Source: TAIR

Keywords - Cellular componenti

NucleusSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G70000.1.

Structurei

3D structure databases

SMRiO04544.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 19CCHC-typeInterPro annotationAdd BLAST15
Domaini92 – 148HTH myb-type DNA-bindingInterPro annotationAdd BLAST57

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410IXSS. Eukaryota.
ENOG4111BIB. LUCA.
HOGENOMiHOG000237594.
OMAiIPPSRKM.
OrthoDBiEOG09360NVY.

Family and domain databases

Gene3Di4.10.60.10. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR017930. Myb_dom.
IPR006447. Myb_dom_plants.
IPR001005. SANT/Myb.
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF00249. Myb_DNA-binding. 1 hit.
SMARTiView protein in SMART
SM00717. SANT. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
TIGRFAMsiTIGR01557. myb_SHAQKYF. 1 hit.
PROSITEiView protein in PROSITE
PS51294. HTH_MYB. 1 hit.
PS50158. ZF_CCHC. 1 hit.

Sequencei

Sequence statusi: Complete.

O04544-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRSCSQCGN NGHNSRTCPT DITTTGDNND KGGGEKAIML FGVRVTEASS
60 70 80 90 100
SCFRKSVSMN NLSQFDQTPD PNPTDDGGYA SDDVVHASGR NRERKRGTPW
110 120 130 140 150
TEEEHRLFLT GLHKVGKGDW RGISRNFVKT RTPTQVASHA QKYFLRRTNQ
160 170 180 190 200
NRRRRRSSLF DITPDSFIGS SKEENQLQTP LELIRPVPIP IPIPPSRKMA
210 220 230 240 250
DLNLNKKKTP ATTEMFPLSL NLQRPSSSTS SSSNEQKARG SRASSGFEAM
260
SSNGDSIMGV A
Length:261
Mass (Da):28,793
Last modified:July 1, 1997 - v1
Checksum:iD0E4C74C639E4625
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002062 Genomic DNA. Translation: AAB61112.1.
BT006413 mRNA. Translation: AAP21221.1.
AY519509 mRNA. Translation: AAS09979.1.
CP002684 Genomic DNA. Translation: AEE35007.1.
CP002684 Genomic DNA. Translation: AEE35008.1.
AK227711 mRNA. Translation: BAE99697.1.
PIRiF96722.
RefSeqiNP_001185359.1. NM_001198430.1.
NP_177158.1. NM_105669.3.
UniGeneiAt.35354.
At.67206.

Genome annotation databases

EnsemblPlantsiAT1G70000.1; AT1G70000.1; AT1G70000.
AT1G70000.2; AT1G70000.2; AT1G70000.
GeneIDi843337.
GrameneiAT1G70000.1; AT1G70000.1; AT1G70000.
AT1G70000.2; AT1G70000.2; AT1G70000.
KEGGiath:AT1G70000.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiO04544_ARATH
AccessioniPrimary (citable) accession number: O04544
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: July 5, 2017
This is version 148 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported