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Protein
Submitted name:

At1g70000

Gene

F20P5.26

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • chromatin binding Source: TAIR
  • DNA binding Source: InterPro
  • transcription coactivator activity Source: GO_Central
  • transcription factor activity, sequence-specific DNA binding Source: TAIR
  • zinc ion binding Source: InterPro

GO - Biological processi

  • chromatin remodeling Source: GO_Central
  • histone acetylation Source: GOC
  • positive regulation of histone acetylation Source: GO_Central
  • regulation of anthocyanin biosynthetic process Source: TAIR
  • regulation of transcription, DNA-templated Source: TAIR
  • regulation of transcription from RNA polymerase II promoter Source: GO_Central
  • response to abscisic acid Source: TAIR
  • response to auxin Source: TAIR
  • response to cadmium ion Source: TAIR
  • response to ethylene Source: TAIR
  • response to gibberellin Source: TAIR
  • response to jasmonic acid Source: TAIR
  • response to karrikin Source: TAIR
  • response to salicylic acid Source: TAIR
  • response to salt stress Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
At1g70000Imported
Submitted name:
F20P5.26 proteinImported
Submitted name:
MYB transcription factorImported
Submitted name:
Myb-like transcription factorImported
Submitted name:
Putative uncharacterized protein At1g70000Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:F20P5.26Imported
Ordered Locus Names:At1g70000Imported, AXX17_At1g64170Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G70000.

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

  • nucleus Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Structurei

3D structure databases

SMRiO04544.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 19CCHC-typeInterPro annotationAdd BLAST15
Domaini92 – 148HTH myb-type DNA-bindingInterPro annotationAdd BLAST57

Phylogenomic databases

eggNOGiENOG410IXSS. Eukaryota.
ENOG4111BIB. LUCA.
HOGENOMiHOG000237594.
OMAiNLSQFDQ.
OrthoDBiEOG09360NVY.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR017930. Myb_dom.
IPR006447. Myb_dom_plants.
IPR001005. SANT/Myb.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00249. Myb_DNA-binding. 1 hit.
[Graphical view]
SMARTiSM00717. SANT. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
TIGRFAMsiTIGR01557. myb_SHAQKYF. 1 hit.
PROSITEiPS51294. HTH_MYB. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O04544-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRSCSQCGN NGHNSRTCPT DITTTGDNND KGGGEKAIML FGVRVTEASS
60 70 80 90 100
SCFRKSVSMN NLSQFDQTPD PNPTDDGGYA SDDVVHASGR NRERKRGTPW
110 120 130 140 150
TEEEHRLFLT GLHKVGKGDW RGISRNFVKT RTPTQVASHA QKYFLRRTNQ
160 170 180 190 200
NRRRRRSSLF DITPDSFIGS SKEENQLQTP LELIRPVPIP IPIPPSRKMA
210 220 230 240 250
DLNLNKKKTP ATTEMFPLSL NLQRPSSSTS SSSNEQKARG SRASSGFEAM
260
SSNGDSIMGV A
Length:261
Mass (Da):28,793
Last modified:July 1, 1997 - v1
Checksum:iD0E4C74C639E4625
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002062 Genomic DNA. Translation: AAB61112.1.
BT006413 mRNA. Translation: AAP21221.1.
AY519509 mRNA. Translation: AAS09979.1.
CP002684 Genomic DNA. Translation: AEE35007.1.
CP002684 Genomic DNA. Translation: AEE35008.1.
AK227711 mRNA. Translation: BAE99697.1.
LUHQ01000001 Genomic DNA. Translation: OAP17644.1.
PIRiF96722.
RefSeqiNP_001185359.1. NM_001198430.1.
NP_177158.1. NM_105669.3.
UniGeneiAt.35354.
At.67206.

Genome annotation databases

EnsemblPlantsiAT1G70000.1; AT1G70000.1; AT1G70000.
AT1G70000.2; AT1G70000.2; AT1G70000.
GeneIDi843337.
GrameneiAT1G70000.1; AT1G70000.1; AT1G70000.
AT1G70000.2; AT1G70000.2; AT1G70000.
KEGGiath:AT1G70000.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002062 Genomic DNA. Translation: AAB61112.1.
BT006413 mRNA. Translation: AAP21221.1.
AY519509 mRNA. Translation: AAS09979.1.
CP002684 Genomic DNA. Translation: AEE35007.1.
CP002684 Genomic DNA. Translation: AEE35008.1.
AK227711 mRNA. Translation: BAE99697.1.
LUHQ01000001 Genomic DNA. Translation: OAP17644.1.
PIRiF96722.
RefSeqiNP_001185359.1. NM_001198430.1.
NP_177158.1. NM_105669.3.
UniGeneiAt.35354.
At.67206.

3D structure databases

SMRiO04544.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G70000.1; AT1G70000.1; AT1G70000.
AT1G70000.2; AT1G70000.2; AT1G70000.
GeneIDi843337.
GrameneiAT1G70000.1; AT1G70000.1; AT1G70000.
AT1G70000.2; AT1G70000.2; AT1G70000.
KEGGiath:AT1G70000.

Organism-specific databases

TAIRiAT1G70000.

Phylogenomic databases

eggNOGiENOG410IXSS. Eukaryota.
ENOG4111BIB. LUCA.
HOGENOMiHOG000237594.
OMAiNLSQFDQ.
OrthoDBiEOG09360NVY.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR017930. Myb_dom.
IPR006447. Myb_dom_plants.
IPR001005. SANT/Myb.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00249. Myb_DNA-binding. 1 hit.
[Graphical view]
SMARTiSM00717. SANT. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
TIGRFAMsiTIGR01557. myb_SHAQKYF. 1 hit.
PROSITEiPS51294. HTH_MYB. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO04544_ARATH
AccessioniPrimary (citable) accession number: O04544
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: November 30, 2016
This is version 141 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.