O04512 (O04512_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
F21M12.30 protein EMBL AAB60743.1

Gene names

Name:

F21M12.30 EMBL AAB60743.1

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	728 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Gene Ontology (GO)
Molecular_function	carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O04512 [UniParc]. Last modified July 1, 1997. Version 1. Checksum: D342A9286BD214A7	FASTA	728	83,379
	10 20 30 40 50 60 MSSHGVHLHV HDRYTEMVQV VMDNGILQVT LSKPGGIITG IEYNGIDNVL EVRNKETNRG 70 80 90 100 110 120 YWDLHWNEPG GKGIFDVYAL YAFTLTFTRI RSSGIISGVT FRVIVETEEQ VEISFLRTWD 130 140 150 160 170 180 PSLEGKYIPL NIDKRFIMLR GSSGVYSYGI YEHLKDWPGF ELGETRIAFK LRKDKKLEML 190 200 210 220 230 240 VIACPCEEYH RFQAKELCNM SDIYLLGLIV RKHKSVFHYM AVADDRKRIM PFPDDLCKGR 250 260 270 280 290 300 CQTLDYQEAS LLTAPCDPRL QGEVDDKYQY SCENKDLRVH GWISFDPPVG FWQITPSNEF 310 320 330 340 350 360 RSGGPLKQNL TSHVGPTTLA VSVPVTYVVF HSTHYAGKTM MPRFEHGEPW KKVYGPVFIY 370 380 390 400 410 420 LNSTANGDDP LCLWDDAKIK MMAEVERWPY SFVASDDYPK SEERGTARGR LLIRDRFINN 430 440 450 460 470 480 DLISARGAYV GLAPPGDSGS WQIECKGYQF WAIADEAGYF SIGNVRPGEY NLYAWVPSFI 490 500 510 520 530 540 GDYHNGTIVR VPAYQPNFDG QNNTGCMIEM GDIVYEPPRD GPTLWEIGIP DRKASEFFIP 550 560 570 580 590 600 DPDPTLVNRV LVHHQDRFIS YTFVNLTAWM FRQYGLWKKY TDMYPNDDLV YTVGVSDYRR 610 620 630 640 650 660 DWFFAHVPRK KGDVHEGTTW QIIFNLENID QKANYKLRVA IASATLAELQ IRINDAEAIR 670 680 690 700 710 720 PLFTTGLIGR DNSIARHGIH GVYMLYAVNI PGNRLVQGDN TIFLKQPRCN GPFQGIMYDY IRLEGPPS

References

[1]

"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC000132 Genomic DNA. Translation: AAB60743.1.
IPI	IPI00517721.
PIR	D86233.
3D structure databases
ProteinModelPortal	O04512.
ModBase	Search...
Protein family/group databases
CAZy	PL4. Polysaccharide Lyase Family 4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Gene expression databases
Genevestigator	O04512.
Family and domain databases
Gene3D	2.60.40.1120. 1 hit.
InterPro	IPR013784. Carb-bd-like_fold. IPR014766. CarboxyPept_regulatory_dom. IPR008979. Galactose-bd-like. IPR010325. Rhamnogal_lyase. [Graphical view]
Pfam	PF06045. Rhamnogal_lyase. 1 hit. [Graphical view]
SUPFAM	SSF49452. CBD_4. 1 hit. SSF49785. Gal_bind_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

O04512_ARATH

Accession

Primary (citable) accession number: O04512

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 1997
Last sequence update:	July 1, 1997
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)