Unreviewed, UniProtKB/TrEMBL O04511 (O04511_ARATH)

Names and origin

Protein names

Submitted name:
    F21M12.28 protein EMBL AAB60742.1

Gene names

ORF Names:

F21M12.28

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	447 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O04511-1 [UniParc]. Last modified July 1, 1997. Version 1. Checksum: 010BF7D33342331F	FASTA	447	51,771
	10 20 30 40 50 60 MSYVKLQLHD KGNHVVMDNG IARVTLSKPD GIVTGIEYNG IDNLLEVLNE EVNRGLNWIM 70 80 90 100 110 120 HCLCFIFRYW DLVWGGSGTA GGFDVIKGSN FEVIVKNEEQ IELSFTRKWD PSQEGKAVPL 130 140 150 160 170 180 NIDKRFVMLS GSSGFYTYAI YEHLKEWPAF SLAETRIAFK LRKEKFHYMA VTDDRQRFMP 190 200 210 220 230 240 LPDDRLPDRG QALAYPEAVL LVNPLESQFK GEVKFIHFFF LFKIIREKLF SCVRSWEDLV 250 260 270 280 290 300 PKFSEGEAWK KVFGPVFVYL NSSTDDDNDP LWLWQDAKSQ MNVEAESWPY SFPASDDYVK 310 320 330 340 350 360 TEQRGNVVGR LLVQDRYVDK DFIAANRGYV GLAVPGAAGS WQRECKEYQF WTRTDEEGFF 370 380 390 400 410 420 YISGIRPGQY NLYAWIPGFI GDYKYDDVIT ITSGCYIYVE DLVYQPPRNG ATLWEIGFPD 430 440 RSAAEFYVPD PNPKYINNLY QNHPDRF

References

[1]

"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed: 11130712] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AC000132 Genomic DNA. Translation: AAB60742.1.
IPI	IPI00516498.
PIR	C86233.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	PL4. Polysaccharide Lyase Family 4.
Genome annotation databases
GenomeReviews	Gene locus AT1G09890 in contig CT485782_GR.
Phylogenomic databases
PhylomeDB	O04511.
Gene expression databases
Genevestigator	O04511.
Family and domain databases
InterPro	IPR013784. Carb-bd-like_fold. IPR008979. Galactose-bd-like. IPR010325. Rhamnogal_lyase. [Graphical view]
Pfam	PF06045. Rhamnogal_lyase. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O04511_ARATH

Accession

Primary (citable) accession number: O04511

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 1997
Last sequence update:	July 1, 1997
Last modified:	November 24, 2009
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)