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Protein

Probable elongation factor 1-gamma 1

Gene

At1g09640

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Probably plays a role in anchoring the complex to other cellular components.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionElongation factor
Biological processProtein biosynthesis

Enzyme and pathway databases

ReactomeiR-ATH-156842 Eukaryotic Translation Elongation

Names & Taxonomyi

Protein namesi
Recommended name:
Probable elongation factor 1-gamma 1
Short name:
EF-1-gamma 1
Alternative name(s):
eEF-1B gamma 1
Gene namesi
Ordered Locus Names:At1g09640
ORF Names:F21M12.3
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G09640
TAIRilocus:2024311 AT1G09640

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002088261 – 414Probable elongation factor 1-gamma 1Add BLAST414

Proteomic databases

PaxDbiO04487
PRIDEiO04487

PTM databases

iPTMnetiO04487
SwissPalmiO04487

Expressioni

Gene expression databases

ExpressionAtlasiO04487 baseline and differential
GenevisibleiO04487 AT

Interactioni

Subunit structurei

EF-1 is composed of four subunits: alpha, beta, delta, and gamma.By similarity

Protein-protein interaction databases

BioGridi22732, 1 interactor
STRINGi3702.AT1G09640.1

Structurei

3D structure databases

ProteinModelPortaliO04487
SMRiO04487
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 82GST N-terminalAdd BLAST82
Domaini87 – 215GST C-terminalAdd BLAST129
Domaini254 – 414EF-1-gamma C-terminalPROSITE-ProRule annotationAdd BLAST161

Phylogenomic databases

eggNOGiKOG0867 Eukaryota
KOG1627 Eukaryota
COG0625 LUCA
HOGENOMiHOG000201196
InParanoidiO04487
KOiK03233
OMAiDYEVYDW
OrthoDBiEOG09360DJV
PhylomeDBiO04487

Family and domain databases

Gene3Di3.30.70.1010, 1 hit
InterProiView protein in InterPro
IPR001662 EF1B_G_C
IPR036433 EF1B_G_C_sf
IPR010987 Glutathione-S-Trfase_C-like
IPR036282 Glutathione-S-Trfase_C_sf
IPR004045 Glutathione_S-Trfase_N
IPR004046 GST_C
IPR036249 Thioredoxin-like_sf
PfamiView protein in Pfam
PF00647 EF1G, 1 hit
PF00043 GST_C, 1 hit
PF02798 GST_N, 1 hit
SMARTiView protein in SMART
SM01183 EF1G, 1 hit
SUPFAMiSSF47616 SSF47616, 1 hit
SSF52833 SSF52833, 1 hit
SSF89942 SSF89942, 1 hit
PROSITEiView protein in PROSITE
PS50040 EF1G_C, 1 hit
PS50405 GST_CTER, 1 hit
PS50404 GST_NTER, 1 hit

Sequencei

Sequence statusi: Complete.

This entry describes 1 isoform i produced by alternative splicing. AlignAdd to basket

Note: A number of isoforms are produced. According to EST sequences.
Isoform 1 (identifier: O04487-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MALVLHTYKG NKSAEKALIA AEYVGVQIDV PSDFQMGVTN KTPAFLKMNP
60 70 80 90 100
IGKVPVLETP EGSVFESNAI ARYVSRLNGD NSLNGSSLIE YAQIEQWIDF
110 120 130 140 150
SSLEIYASIL RWFGPRMGFM PYSAPAEEGA ISTLKRALDA LNTHLTSNTY
160 170 180 190 200
LVGHSITLAD IITVCNLNLG FATVMTKKFT SEFPHVERYF WTVVNQPNFT
210 220 230 240 250
KVLGDVKQTE AVPPIASKKA AQPAKPKEEP KKKEAPVAEA PKLAEEEEAP
260 270 280 290 300
KPKAKNPLDL LPPSPMVLDD WKRLYSNTKS NFREVAIKGF WDMYDPEGYS
310 320 330 340 350
LWFCDYKYND ENMVSFVTLN KVGGFLQRMD LARKYSFGKM LICGSEGPFK
360 370 380 390 400
VKGLWLFRGP EIPKFIMDEV YDMELYEWTK VDISDEAQKE RVSQMIEDAE
410
PFEGEALLDA KCFK
Length:414
Mass (Da):46,661
Last modified:July 1, 1997 - v1
Checksum:iD41EC8C9C0B03C5D
GO

Sequence cautioni

The sequence AY089154 differs from that shown. Reason: Frameshift at position 25.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC000132 Genomic DNA Translation: AAB60721.1
CP002684 Genomic DNA Translation: AEE28472.1
AY089154 mRNA No translation available.
AY080820 mRNA Translation: AAL87298.1
PIRiB86230
RefSeqiNP_563848.1, NM_100836.4 [O04487-1]
UniGeneiAt.23720
At.43279

Genome annotation databases

EnsemblPlantsiAT1G09640.1; AT1G09640.1; AT1G09640 [O04487-1]
GeneIDi837491
GrameneiAT1G09640.1; AT1G09640.1; AT1G09640 [O04487-1]
KEGGiath:AT1G09640

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Entry informationi

Entry nameiEF1G1_ARATH
AccessioniPrimary (citable) accession number: O04487
Secondary accession number(s): Q8RXL5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: July 1, 1997
Last modified: May 23, 2018
This is version 135 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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