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Protein

Ras-related protein RABA2a

Gene

RABA2A

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Intracellular vesicle trafficking and protein transport.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi19 – 26GTPBy similarity8
Nucleotide bindingi67 – 71GTPBy similarity5
Nucleotide bindingi125 – 128GTPBy similarity4
Nucleotide bindingi155 – 156GTPBy similarity2

GO - Molecular functioni

GO - Biological processi

  • cytokinesis by cell plate formation Source: TAIR
  • protein transport Source: UniProtKB-KW

Keywordsi

Biological processProtein transport, Transport
LigandGTP-binding, Nucleotide-binding

Enzyme and pathway databases

ReactomeiR-ATH-8873719 RAB geranylgeranylation

Names & Taxonomyi

Protein namesi
Recommended name:
Ras-related protein RABA2a
Short name:
AtRABA2a
Alternative name(s):
Ras-related protein Rab11C
Short name:
AtRab11C
Gene namesi
Name:RABA2A
Synonyms:RAB11C
Ordered Locus Names:At1g09630
ORF Names:F21M12.2
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G09630
TAIRilocus:2024276 AT1G09630

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Endosome, Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001211651 – 214Ras-related protein RABA2aAdd BLAST214
PropeptideiPRO_0000370754215 – 217Removed in mature formSequence analysis3

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi213S-palmitoyl cysteineBy similarity1
Modified residuei214Cysteine methyl esterSequence analysis1
Lipidationi214S-geranylgeranyl cysteineBy similarity1

Keywords - PTMi

Lipoprotein, Methylation, Palmitate, Prenylation

Proteomic databases

PaxDbiO04486
PRIDEiO04486

PTM databases

iPTMnetiO04486

Expressioni

Tissue specificityi

Expressed in root tips.1 Publication

Gene expression databases

ExpressionAtlasiO04486 baseline and differential
GenevisibleiO04486 AT

Interactioni

Protein-protein interaction databases

BioGridi22731, 3 interactors
IntActiO04486, 4 interactors
MINTiO04486
STRINGi3702.AT1G09630.1

Structurei

3D structure databases

ProteinModelPortaliO04486
SMRiO04486
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi41 – 49Effector regionBy similarity9

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

eggNOGiKOG0087 Eukaryota
COG1100 LUCA
HOGENOMiHOG000233968
InParanoidiO04486
KOiK07904
OMAiKHSTYES
OrthoDBiEOG09360M9A
PhylomeDBiO04486

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O04486-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARRPDEEYD YLFKVVLIGD SGVGKSNLLS RFTRNEFCLE SKSTIGVEFA
60 70 80 90 100
TRTLQVEGRT VKAQIWDTAG QERYRAITSA YYRGALGALL VYDVTKPTTF
110 120 130 140 150
ENVSRWLKEL RDHADSNIVI MLIGNKTDLK HLRAVATEDA QSYAEKEGLS
160 170 180 190 200
FIETSALEAL NVEKAFQTIL SEVYRIISKK SISSDQTTAN ANIKEGQTID
210
VAATSESNAK KPCCSSS
Length:217
Mass (Da):24,108
Last modified:July 1, 1997 - v1
Checksum:iD8DBFD3192FD92C8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U74669 mRNA Translation: AAB61994.1
AC000132 Genomic DNA Translation: AAB60720.1
CP002684 Genomic DNA Translation: AEE28471.1
AY045620 mRNA Translation: AAK73978.1
AY133657 mRNA Translation: AAM91487.1
AY085684 mRNA Translation: AAM62903.1
PIRiA86230
RefSeqiNP_172434.1, NM_100835.3
UniGeneiAt.20265

Genome annotation databases

EnsemblPlantsiAT1G09630.1; AT1G09630.1; AT1G09630
GeneIDi837490
GrameneiAT1G09630.1; AT1G09630.1; AT1G09630
KEGGiath:AT1G09630

Similar proteinsi

Entry informationi

Entry nameiRAA2A_ARATH
AccessioniPrimary (citable) accession number: O04486
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: July 1, 1997
Last modified: May 23, 2018
This is version 146 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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