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Protein

Ferredoxin, chloroplastic

Gene

PETF

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.By similarity

Cofactori

[2Fe-2S] clusterBy similarityNote: Binds 1 [2Fe-2S] cluster.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi89Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi94Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi97Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi127Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1

GO - Molecular functioni

Keywordsi

Biological processElectron transport, Transport
Ligand2Fe-2S, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin, chloroplastic
Gene namesi
Name:PETF
ORF Names:PHYPADRAFT_190267, PHYPADRAFT_190462
OrganismiPhyscomitrella patens subsp. patens (Moss)
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 48ChloroplastBy similarityAdd BLAST48
ChainiPRO_000000883749 – 145Ferredoxin, chloroplasticAdd BLAST97

Proteomic databases

PRIDEiO04166

Interactioni

Subunit structurei

Forms a complex with heterodimeric ferredoxin-thioredoxin reductase (FTR) and thioredoxin.By similarity

Protein-protein interaction databases

STRINGi3218.PP1S146_120V6.1

Structurei

3D structure databases

ProteinModelPortaliO04166
SMRiO04166
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini51 – 1432Fe-2S ferredoxin-typePROSITE-ProRule annotationAdd BLAST93

Sequence similaritiesi

Belongs to the 2Fe2S plant-type ferredoxin family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410IYZG Eukaryota
COG0633 LUCA
HOGENOMiHOG000217152
KOiK02639
OMAiEEGHEIP

Family and domain databases

CDDicd00207 fer2, 1 hit
Gene3Di3.10.20.30, 1 hit
InterProiView protein in InterPro
IPR036010 2Fe-2S_ferredoxin-like_sf
IPR001041 2Fe-2S_ferredoxin-type
IPR006058 2Fe2S_fd_BS
IPR012675 Beta-grasp_dom_sf
IPR010241 Fd_pln
PfamiView protein in Pfam
PF00111 Fer2, 1 hit
SUPFAMiSSF54292 SSF54292, 1 hit
TIGRFAMsiTIGR02008 fdx_plant, 1 hit
PROSITEiView protein in PROSITE
PS00197 2FE2S_FER_1, 1 hit
PS51085 2FE2S_FER_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O04166-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAAMTSIV PVASIAPVSK VANVRPSSVS VAKAFGLKSR SMGRLTCMAT
60 70 80 90 100
YKVTFLDGET GAENVVECSD EEYVLDAAER AGMDLPYSCR AGACSSCAGI
110 120 130 140
IKAGEVDQSD QSFLDDSQID DGFVLTCVAY PASDCIILTH QEENM
Length:145
Mass (Da):15,217
Last modified:September 3, 2014 - v2
Checksum:iD37C7BE216629C82
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y12734 mRNA Translation: CAA73265.1
DS545032 Genomic DNA Translation: EDQ63350.1
DS545035 Genomic DNA Translation: EDQ63083.1
RefSeqiXP_001771921.1, XM_001771869.1
XP_001772139.1, XM_001772087.1
UniGeneiPpa.3073

Genome annotation databases

EnsemblPlantsiPP1S143_176V6.1; PP1S143_176V6.1; PP1S143_176V6
PP1S146_120V6.1; PP1S146_120V6.1; PP1S146_120V6
GrameneiPP1S143_176V6.1; PP1S143_176V6.1; PP1S143_176V6
PP1S146_120V6.1; PP1S146_120V6.1; PP1S146_120V6
KEGGippp:PHYPADRAFT_190267
ppp:PHYPADRAFT_190462

Similar proteinsi

Entry informationi

Entry nameiFER_PHYPA
AccessioniPrimary (citable) accession number: O04166
Secondary accession number(s): A9SZY5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 16, 2001
Last sequence update: September 3, 2014
Last modified: May 23, 2018
This is version 98 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

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