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Protein

Auxin-binding protein ABP19b

Gene

ABP19B

Organism
Prunus persica (Peach) (Amygdalus persica)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Probable receptor for the plant growth-promoting hormone auxin.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi101 – 1011ManganeseBy similarity
Metal bindingi103 – 1031ManganeseBy similarity
Metal bindingi108 – 1081ManganeseBy similarity
Metal bindingi147 – 1471ManganeseBy similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Receptor

Keywords - Biological processi

Auxin signaling pathway

Keywords - Ligandi

Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Auxin-binding protein ABP19b
Gene namesi
Name:ABP19B
OrganismiPrunus persica (Peach) (Amygdalus persica)
Taxonomic identifieri3760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsRosalesRosaceaeMaloideaeAmygdaleaePrunus

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Cell wall, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 209191Auxin-binding protein ABP19bPRO_0000010844Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi24 ↔ 39By similarity
Glycosylationi60 – 601N-linked (GlcNAc...)Sequence analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Interactioni

Subunit structurei

Interacts with ABP20.

Structurei

3D structure databases

ProteinModelPortaliO04012.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the germin family.Curated

Keywords - Domaini

Signal

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR006045. Cupin_1.
IPR001929. Germin.
IPR019780. Germin_Mn-BS.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 1 hit.
[Graphical view]
PRINTSiPR00325. GERMIN.
SMARTiSM00835. Cupin_1. 1 hit.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.
PROSITEiPS00725. GERMIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O04012-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIFPIFFTFF LLLSTSHASV QDFCVADYKA PDGPAGYSCK KPAIVTVNDF
60 70 80 90 100
VYSGLGIAGN TTNIFKAAVT PAFAAQFPGV NGLGISLARL DLGPGGVVPF
110 120 130 140 150
HTHPGASEVL LVVQGTIIAG FVASDNTPYL KTLKKGDIIV FPQGLLHFQV
160 170 180 190 200
NGGDTPAIAF PSFSSPSPGL QIVDFALFKN DLATELIAQT TLLDAPQIKK

LKGVLGGTN
Length:209
Mass (Da):21,856
Last modified:July 1, 1997 - v1
Checksum:i886FD412BD8DF771
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U81163 Genomic DNA. Translation: AAB51241.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U81163 Genomic DNA. Translation: AAB51241.1.

3D structure databases

ProteinModelPortaliO04012.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR006045. Cupin_1.
IPR001929. Germin.
IPR019780. Germin_Mn-BS.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 1 hit.
[Graphical view]
PRINTSiPR00325. GERMIN.
SMARTiSM00835. Cupin_1. 1 hit.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.
PROSITEiPS00725. GERMIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Cloning of genes encoding auxin-binding proteins (ABP19/20) from peach: significant peptide sequence similarity with germin-like proteins."
    Ohmiya A., Tanaka Y., Kadowaki K., Hayashi T.
    Plant Cell Physiol. 39:492-499(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: cv. Akatsuki.
    Tissue: Shoot apex.

Entry informationi

Entry nameiAB19B_PRUPE
AccessioniPrimary (citable) accession number: O04012
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 29, 2001
Last sequence update: July 1, 1997
Last modified: May 27, 2015
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.