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Protein

Auxin-binding protein ABP20

Gene

ABP20

Organism
Prunus persica (Peach) (Amygdalus persica)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Probable receptor for the plant growth-promoting hormone auxin.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi106ManganeseBy similarity1
Metal bindingi108ManganeseBy similarity1
Metal bindingi113ManganeseBy similarity1
Metal bindingi152ManganeseBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionReceptor
Biological processAuxin signaling pathway
LigandManganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Auxin-binding protein ABP20
Gene namesi
Name:ABP20
OrganismiPrunus persica (Peach) (Amygdalus persica)
Taxonomic identifieri3760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsRosalesRosaceaeAmygdaloideaeAmygdaleaePrunus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Apoplast, Cell wall, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_000001084524 – 214Auxin-binding protein ABP20Add BLAST191

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi29 ↔ 44By similarity
Glycosylationi65N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Disulfide bond, Glycoprotein

Interactioni

Subunit structurei

Interacts with ABP19.

Structurei

3D structure databases

ProteinModelPortaliO04011
SMRiO04011
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the germin family.Curated

Keywords - Domaini

Signal

Family and domain databases

Gene3Di2.60.120.10, 1 hit
InterProiView protein in InterPro
IPR006045 Cupin_1
IPR001929 Germin
IPR019780 Germin_Mn-BS
IPR014710 RmlC-like_jellyroll
IPR011051 RmlC_Cupin_sf
PfamiView protein in Pfam
PF00190 Cupin_1, 1 hit
PRINTSiPR00325 GERMIN
SMARTiView protein in SMART
SM00835 Cupin_1, 1 hit
SUPFAMiSSF51182 SSF51182, 1 hit
PROSITEiView protein in PROSITE
PS00725 GERMIN, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O04011-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPQATMIFPI LFTFFLLLSS SNAAVQDFCV ADLAAPEGPA GFSCKKPASV
60 70 80 90 100
KVNDFVFSGL GIAGNTSNII KAAVTPAFVA QFPGVNGLGI SIARLDLAVG
110 120 130 140 150
GVVPFHTHPG ASEVLIVAQG TICAGFVASD NTPYLQTLEK GDIMVFPQGL
160 170 180 190 200
LHFQVNGGEA PALAFASFGS ASPGLQILDF ALFKNDLPTE VIAQTTFLDA
210
AQIKKLKGVL GGTN
Length:214
Mass (Da):22,087
Last modified:July 1, 1997 - v1
Checksum:iCC40E24ADEBF541E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U81162 mRNA Translation: AAB51240.1
UniGeneiPpe.19141

Genome annotation databases

EnsemblPlantsiONH97603; ONH97603; PRUPE_7G200100
GrameneiONH97603; ONH97603; PRUPE_7G200100

Entry informationi

Entry nameiABP20_PRUPE
AccessioniPrimary (citable) accession number: O04011
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 29, 2001
Last sequence update: July 1, 1997
Last modified: May 23, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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