Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

NADH-ubiquinone oxidoreductase chain 5

Gene

nad5

Organism
Vicia faba (Broad bean) (Faba vulgaris)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

NADH + ubiquinone + 5 H+(In) = NAD+ + ubiquinol + 4 H+(Out).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationSAAS annotation

Keywords - Ligandi

NADUniRule annotation, UbiquinoneUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
NADH-ubiquinone oxidoreductase chain 5UniRule annotation (EC:1.6.5.3UniRule annotation)
Gene namesi
Name:nad5Imported
Encoded oniMitochondrionImported
OrganismiVicia faba (Broad bean) (Faba vulgaris)Imported
Taxonomic identifieri3906 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaeFabeaeVicia

Subcellular locationi

  • Mitochondrion inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei83 – 10119HelicalSequence analysisAdd
BLAST
Transmembranei113 – 13018HelicalSequence analysisAdd
BLAST
Transmembranei136 – 15520HelicalSequence analysisAdd
BLAST
Transmembranei215 – 23117HelicalSequence analysisAdd
BLAST
Transmembranei251 – 27020HelicalSequence analysisAdd
BLAST
Transmembranei282 – 30423HelicalSequence analysisAdd
BLAST
Transmembranei310 – 33021HelicalSequence analysisAdd
BLAST
Transmembranei342 – 35918HelicalSequence analysisAdd
BLAST
Transmembranei379 – 39921HelicalSequence analysisAdd
BLAST
Transmembranei420 – 44324HelicalSequence analysisAdd
BLAST
Transmembranei463 – 48119HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, MitochondrionUniRule annotationImported

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1616Sequence analysisAdd
BLAST
Chaini17 – 483467NADH-ubiquinone oxidoreductase chain 5Sequence analysisPRO_5004156631Add
BLAST

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini63 – 11856Proton_antipo_NInterPro annotationAdd
BLAST
Domaini132 – 419288Proton_antipo_MInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the complex I subunit 5 family.UniRule annotationSAAS annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Family and domain databases

InterProiIPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
IPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
[Graphical view]
PfamiPF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
[Graphical view]
PRINTSiPR01435. NPOXDRDTASE5.
TIGRFAMsiTIGR01974. NDH_I_L. 1 hit.

Sequencei

Sequence statusi: Complete.

O03386-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYLLIVFLPL LGSSVAGFFG RFLGSEGTAI MTTTCVSFSS ILSLIAFYEV
60 70 80 90 100
APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS
110 120 130 140 150
ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL
160 170 180 190 200
IHFWFTRLQA DKAATKAMPV NRVGDFGLAP GISGRFTLFQ TVDFSTIFAR
210 220 230 240 250
ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT
260 270 280 290 300
PVSALIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT
310 320 330 340 350
GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL
360 370 380 390 400
SAGSVIHAMS DEQDMRKMGG LASSFPFTYA MMLMGSLSLI GFPFLTGFYS
410 420 430 440 450
KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRSLFL TFLVPTNSFG
460 470 480
RDILRCHDAP IPMAIPLILL ALGSLFVGYL AKV
Length:483
Mass (Da):52,617
Last modified:July 1, 1997 - v1
Checksum:i57F57DE1286EDC04
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y12731 Genomic DNA. Translation: CAA73263.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y12731 Genomic DNA. Translation: CAA73263.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
IPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
[Graphical view]
PfamiPF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
[Graphical view]
PRINTSiPR01435. NPOXDRDTASE5.
TIGRFAMsiTIGR01974. NDH_I_L. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Variant mitochondrial transcripts of a broad bean line are associated with two point mutations located upstream of nad5 exon c."
    Scheepers D.G.J.M., Luo H., Boutry M.
    Plant Sci. 129:203-212(1997)
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO03386_VICFA
AccessioniPrimary (citable) accession number: O03386
Secondary accession number(s): O03249
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: May 11, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.