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Protein
Submitted name:

Lipid Binding Protein

Gene

lbp-8

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • lipid binding Source: WormBase
  • transporter activity Source: InterPro

GO - Biological processi

  • lipid transport Source: WormBase

Keywordsi

Biological processTransportUniRule annotation

Enzyme and pathway databases

ReactomeiR-CEL-163560. Triglyceride catabolism.
R-CEL-2453902. The canonical retinoid cycle in rods (twilight vision).
R-CEL-5362517. Signaling by Retinoic Acid.
R-CEL-5365859. RA biosynthesis pathway.
R-CEL-6798695. Neutrophil degranulation.
R-CEL-975634. Retinoid metabolism and transport.

Names & Taxonomyi

Protein namesi
Submitted name:
Lipid Binding ProteinImported
Gene namesi
Name:lbp-8Imported
ORF Names:CELE_T22G5.6Imported, T22G5.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiT22G5.6; CE41159; WBGene00002260; lbp-8.

PTM / Processingi

Proteomic databases

PaxDbiO02324.
PeptideAtlasiO02324.

Expressioni

Gene expression databases

BgeeiWBGene00002260.

Interactioni

Protein-protein interaction databases

STRINGi6239.T22G5.6.

Structurei

3D structure databases

ProteinModelPortaliO02324.
SMRiO02324.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 26FABPInterPro annotationAdd BLAST18

Sequence similaritiesi

Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG4015. Eukaryota.
ENOG4111US8. LUCA.
GeneTreeiENSGT00760000118898.
HOGENOMiHOG000004829.
InParanoidiO02324.
KOiK08752.
OMAiPTIVISH.
OrthoDBiEOG091G0QSV.
PhylomeDBiO02324.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiView protein in InterPro
IPR012674. Calycin.
IPR000463. Fatty_acid-bd.
IPR031259. ILBP.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
PANTHERiPTHR11955. PTHR11955. 1 hit.
PfamiView protein in Pfam
PF00061. Lipocalin. 1 hit.
PRINTSiPR00178. FATTYACIDBP.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiView protein in PROSITE
PS00214. FABP. 1 hit.

Sequencei

Sequence statusi: Complete.

O02324-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSMKEFIGR WKLVHSENFE EYLKEIGVGL LIRKAASLTS PTLEIKLDGD
60 70 80 90 100
TWHFNQYSTF KNNKLAFKIR EKFVEIAPDE RSYNTLVTFE NGKFISHQDK
110 120 130
IKENHHSSVF TTWLENGKLL QTYQSGSVIC RREFVKE
Length:137
Mass (Da):16,092
Last modified:July 10, 2007 - v2
Checksum:iEFF96E41019F5551
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB03391.2.
PIRiT25127.
RefSeqiNP_506444.2. NM_074043.4.
UniGeneiCel.27782.

Genome annotation databases

EnsemblMetazoaiT22G5.6; T22G5.6; WBGene00002260.
GeneIDi188761.
KEGGicel:CELE_T22G5.6.
UCSCiT22G5.6. c. elegans.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiO02324_CAEEL
AccessioniPrimary (citable) accession number: O02324
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 10, 2007
Last modified: July 5, 2017
This is version 126 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported