Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Fatty acid-binding protein homolog 7

Gene

lbp-7

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

Lipid-binding

Enzyme and pathway databases

ReactomeiR-CEL-163560. Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis.
R-CEL-2453902. The canonical retinoid cycle in rods (twilight vision).
R-CEL-5362517. Signaling by Retinoic Acid.
R-CEL-5365859. RA biosynthesis pathway.
R-CEL-975634. Retinoid metabolism and transport.

Names & Taxonomyi

Protein namesi
Recommended name:
Fatty acid-binding protein homolog 7
Gene namesi
Name:lbp-7
ORF Names:T22G5.2
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiT22G5.2; CE13984; WBGene00002259; lbp-7.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 137137Fatty acid-binding protein homolog 7PRO_0000067425Add
BLAST

Proteomic databases

EPDiO02323.
PaxDbiO02323.
PRIDEiO02323.

2D gel databases

World-2DPAGE0011:O02323.

Interactioni

Protein-protein interaction databases

BioGridi56199. 1 interaction.
DIPiDIP-26392N.
IntActiO02323. 1 interaction.
MINTiMINT-1068680.
STRINGi6239.T22G5.2.

Structurei

3D structure databases

ProteinModelPortaliO02323.
SMRiO02323. Positions 4-137.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG4015. Eukaryota.
ENOG4111US8. LUCA.
GeneTreeiENSGT00760000118898.
HOGENOMiHOG000004829.
InParanoidiO02323.
OMAiVICRREY.
OrthoDBiEOG7NW6BZ.
PhylomeDBiO02323.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000463. Fatty_acid-bd.
IPR031259. iLBP.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
[Graphical view]
PANTHERiPTHR11955. PTHR11955. 1 hit.
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR00178. FATTYACIDBP.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00214. FABP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O02323-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASMNDFIGR WKLVQTENFD EYMKEIGVGL ITRKAAAHLK PILEIRLDGE
60 70 80 90 100
TWNFDQFSTF KNTKLSFKLG EEFVENSPDD RTYNSLFTFE NGKLTHRQNK
110 120 130
IKENHKSSVL TTWLENGKLI QTYQSGDVIC RREWERE
Length:137
Mass (Da):16,170
Last modified:July 1, 1997 - v1
Checksum:iE1AE6A8ED670B948
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z81127 Genomic DNA. Translation: CAB03387.1.
PIRiT25123.
RefSeqiNP_506440.1. NM_074039.1.
UniGeneiCel.2988.

Genome annotation databases

EnsemblMetazoaiT22G5.2; T22G5.2; WBGene00002259.
GeneIDi191701.
KEGGicel:CELE_T22G5.2.
UCSCiT22G5.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z81127 Genomic DNA. Translation: CAB03387.1.
PIRiT25123.
RefSeqiNP_506440.1. NM_074039.1.
UniGeneiCel.2988.

3D structure databases

ProteinModelPortaliO02323.
SMRiO02323. Positions 4-137.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi56199. 1 interaction.
DIPiDIP-26392N.
IntActiO02323. 1 interaction.
MINTiMINT-1068680.
STRINGi6239.T22G5.2.

2D gel databases

World-2DPAGE0011:O02323.

Proteomic databases

EPDiO02323.
PaxDbiO02323.
PRIDEiO02323.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT22G5.2; T22G5.2; WBGene00002259.
GeneIDi191701.
KEGGicel:CELE_T22G5.2.
UCSCiT22G5.2. c. elegans.

Organism-specific databases

CTDi191701.
WormBaseiT22G5.2; CE13984; WBGene00002259; lbp-7.

Phylogenomic databases

eggNOGiKOG4015. Eukaryota.
ENOG4111US8. LUCA.
GeneTreeiENSGT00760000118898.
HOGENOMiHOG000004829.
InParanoidiO02323.
OMAiVICRREY.
OrthoDBiEOG7NW6BZ.
PhylomeDBiO02323.

Enzyme and pathway databases

ReactomeiR-CEL-163560. Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis.
R-CEL-2453902. The canonical retinoid cycle in rods (twilight vision).
R-CEL-5362517. Signaling by Retinoic Acid.
R-CEL-5365859. RA biosynthesis pathway.
R-CEL-975634. Retinoid metabolism and transport.

Miscellaneous databases

PROiO02323.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000463. Fatty_acid-bd.
IPR031259. iLBP.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
[Graphical view]
PANTHERiPTHR11955. PTHR11955. 1 hit.
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR00178. FATTYACIDBP.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00214. FABP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiFABP7_CAEEL
AccessioniPrimary (citable) accession number: O02323
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: July 1, 1997
Last modified: June 8, 2016
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.